Evidence map›Paper›PMID 21957046›Full record

ReviewWiley interdisciplinary reviews. RNA

Mechanisms of endonuclease-mediated mRNA decay.

Daniel R Schoenberg

Open access · greenAbstract readReview
In one paragraph

Review in Wiley interdisciplinary reviews. RNA. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 78 citations in OpenAlex.

  1. Article
  2. Residual Genetic Material in Mature Red Blood Cells.International journal of molecular sciences · 2025
    Review
  3. Article
  4. Advances in nucleic acid-based cancer vaccines.Journal of biomedical science · 2025
    Review
  5. Defining the True Native Ends of RNAs at Single-Molecule Level with TERA-Seq.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Control of RNA degradation in cell fate decision.Frontiers in cell and developmental biology · 2023
    Review
  11. Article
  12. Article
  13. mRNA nanomedicine: Design and recent applications.Exploration (Beijing, China) · 2022
    Review
  14. Review
  15. Article
  16. Eukaryotic mRNA Decapping Activation.Frontiers in genetics · 2022
    Review
  17. Review
  18. Article
  19. Review
  20. mRNA structure regulates protein expression through changes in functional half-life.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Daniel R SchoenbergCenter for RNA Biology and Department of Molecular and Cellular Biochemistry, The Ohio State University, Columbus, OH, USA. schoenberg.3@osu.edu
The Ohio State University · US

Funding

Hormonal Regulation of mRNA StabilityR01GM038277 · NIGMS · OHIO STATE UNIVERSITY · PI SCHOENBERG, DANIEL R. · 1987 to 2013
$4.8M
Nonsense codon activation of endonuclease-mediated mRNA decayR01GM079707 · NIGMS · OHIO STATE UNIVERSITY · PI SCHOENBERG, DANIEL R. · 2009 to 2012
$1.2M
NIGMS NIH HHS GM038277NIGMS NIH HHS GM079707NIGMS NIH HHS R01 GM038277NIGMS NIH HHS R01 GM079707
6 · The paper itself

Abstract

Endonuclease cleavage was one of the first identified mechanisms of mRNA decay but until recently it was thought to play a minor role to the better-known processes of deadenylation, decapping, and exonuclease-catalyzed decay. Most of the early examples of endonuclease decay came from studies of a particular mRNA whose turnover changed in response to hormone, cytokine, developmental, or nutritional stimuli. Only a few of these examples of endonuclease-mediated mRNA decay progressed to the point where the enzyme responsible for the initiating event was identified and studied in detail. The discovery of microRNAs and RISC-catalyzed endonuclease cleavage followed by the identification of PIN (pilT N-terminal) domains that impart endonuclease activity to a number of the proteins involved in mRNA decay has led to a resurgence of interest in endonuclease-mediated mRNA decay. PIN domains show no substrate selectivity and their involvement in a number of decay pathways highlights a recurring theme that the context in which an endonuclease function is a primary factor in determining whether any given mRNA will be targeted for decay by this or the default exonuclease-mediated decay processes.

Indexed as

alpha-GlobinsAnimalsApolipoproteinsCarrier ProteinsCyclin-Dependent Kinase Inhibitor p27DNA-(Apurinic or Apyrimidinic Site) LyaseDNA HelicasesEndonucleasesEndoribonucleasesFemaleHomeodomain ProteinsHumansInsulin-Like Growth Factor IIInterleukin-8Lipoproteins, VLDLMalealpha-GlobinsApolipoproteinsapolipoprotein VLDL IICarrier ProteinsCyclin-Dependent Kinase Inhibitor p27DNA-(Apurinic or Apyrimidinic Site) LyaseDNA HelicasesEndonucleasesEndoribonucleasesErn1 protein, mouseG3bp1 protein, mouseHomeodomain ProteinsInsulin-Like Growth Factor IIInterleukin-8Lipoproteins, VLDLPoly-ADP-Ribose Binding Proteinspolysomal RNase 1Protein Serine-Threonine KinasesReceptors, TransferrinRibonucleasesRNA HelicasesRNA, MessengerRNA Recognition Motif ProteinsSMG6 protein, humanTelomeraseZc3h12a protein, mouse

Identifiers

PMID21957046
PMCPMC3347869
OpenAlexW2017198518

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.