Evidence map›Paper›PMID 21956942›Full record

ReviewWiley interdisciplinary reviews. RNA

The role of AUF1 in regulated mRNA decay.

Frances M Gratacós, Gary Brewer

Abstract readReview
In one paragraph

Review in Wiley interdisciplinary reviews. RNA. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed, 195 citations in OpenAlex.

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  20. NClinical and translational medicine · 2023
    Article

70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Frances M GratacósDepartment of Molecular Genetics, Microbiology and Immunology, UMDNJ-Robert Wood Johnson Medical School, Piscataway, New Jersey 08854-5635, USA.
Gary Brewer
Johnson University · US

Funding

Translational Regulation by the TNF Alpha AU-rich ElementP01AI057596 · NIAID · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI PESTKA, SIDNEY · 2004 to 2009
$8.8M
POST TRANSCRIPTIONAL REGULATION--ONCOGENE MESSENGER RNAR01CA052443 · NCI · WAKE FOREST UNIVERSITY · PI BREWER, GARY A. · 1990 to 2012
$4.3M
Inter-University Doctoral Degree:Puerto Rico to RutgersR25GM058389 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI LANGER, JEROME ALAN, RIOS-VELAZQUEZ, CARLOS · 1998 to 2016
$3.0M
NCI NIH HHS CA052443NCI NIH HHS R01 CA052443NIAID NIH HHS AI057596NIAID NIH HHS P01 AI057596NIGMS NIH HHS R25 GM058389
6 · The paper itself

Abstract

Messenger ribonucleic acid (mRNA) turnover is a major control point in gene expression. In mammals, many mRNAs encoding inflammatory cytokines, oncoproteins, and G-protein-coupled receptors are destabilized by the presence of AU-rich elements (AREs) in their 3'-untranslated regions. Association of ARE-binding proteins (AUBPs) with these mRNAs promotes rapid mRNA degradation. ARE/poly(U)-binding/degradation factor 1 (AUF1), one of the best-characterized AUBPs, binds to many ARE-mRNAs and assembles other factors necessary to recruit the mRNA degradation machinery. These factors include translation initiation factor eIF4G, chaperones hsp27 and hsp70, heat-shock cognate protein hsc70, lactate dehydrogenase, poly(A)-binding protein, and other unidentified proteins. Numerous signaling pathways alter the composition of this AUF1 complex of proteins to effect changes in ARE-mRNA degradation rates. This review briefly describes the roles of mRNA decay in gene expression in general and ARE-mediated decay (AMD) in particular, with a focus on AUF1 and the different modes of regulation that govern AUF1 involvement in AMD.

Indexed as

Amino Acid SequenceAnimalsGene Expression RegulationHeterogeneous-Nuclear Ribonucleoprotein DHeterogeneous Nuclear Ribonucleoprotein D0HumansModels, BiologicalProtein BindingProtein Processing, Post-TranslationalRegulatory Sequences, Ribonucleic AcidRNA Processing, Post-TranscriptionalRNA StabilityHeterogeneous-Nuclear Ribonucleoprotein DHeterogeneous Nuclear Ribonucleoprotein D0HNRNPD protein, humanRegulatory Sequences, Ribonucleic Acid

Identifiers

PMID21956942
PMCPMC3608466
OpenAlexW2163482854

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.