Evidence map›Paper›PMID 21956429›Full record

ArticleDalton transactions (Cambridge, England : 2003)2011

Prediction of high-valent iron K-edge absorption spectra by time-dependent density functional theory.

P Chandrasekaran, S Chantal E Stieber, Terrence J Collins, Lawrence Que, Frank Neese, Serena DeBeer

Abstract read
In one paragraph

Article in Dalton transactions (Cambridge, England : 2003), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Experimental electronic structures of the FeProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Operando Characterization of Fe in Doped NiJournal of the American Chemical Society · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The Asp1 pyrophosphatase from S. pombe hosts a [2Fe-2S]Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Spectroscopic Description of the EInorganic chemistry · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

P ChandrasekaranDepartment of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.
S Chantal E Stieber
Terrence J Collins
Lawrence Que
Frank Neese
Serena DeBeer

Funding

Synthetic Models and Spectroscopy of Nonheme Diiron EnzymesR01GM038767 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI QUE, LAWRENCE · 1987 to 2018
$5.8M
NONHEME IRON OXYGEN ACTIVATION IN ENZYMES AND MODELSR37GM033162 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI QUE, LAWRENCE · 2000 to 2009
$3.2M
NON-HEME IRON OXYGEN ACTIVATION IN ENZYMES AND MODELSR01GM033162 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI QUE, LAWRENCE · 1985 to 1999
–
NIGMS NIH HHS GM-33162NIGMS NIH HHS GM-38767NIGMS NIH HHS R01 GM033162NIGMS NIH HHS R01 GM038767NIGMS NIH HHS R37 GM033162
6 · The paper itself

Abstract

In recent years, a number of high-valent iron intermediates have been identified as reactive species in iron-containing metalloproteins. Inspired by the interest in these highly reactive species, chemists have synthesized Fe(IV) and Fe(V) model complexes with terminal oxo or nitrido groups, as well as a rare example of an Fe(VI)-nitrido species. In all these cases, X-ray absorption spectroscopy has played a key role in the identification and characterization of these species, with both the energy and intensity of the pre-edge features providing spectroscopic signatures for both the oxidation state and the local site geometry. Here we build on a time-dependent DFT methodology for the prediction of Fe K- pre-edge features, previously applied to ferrous and ferric complexes, and extend it to a range of Fe(IV), Fe(V) and Fe(VI) complexes. The contributions of oxidation state, coordination environment and spin state to the spectral features are discussed. These methods are then extended to calculate the spectra of the heme active site of P450 Compound II and the non-heme active site of TauD. The potential for using these methods in a predictive manner is highlighted.

Indexed as

Quantum TheoryX-Ray Absorption SpectroscopyCatalytic DomainCytochrome P-450 Enzyme SystemHemeIronMixed Function OxygenasesModels, MolecularTime FactorsCytochrome P-450 Enzyme SystemHemeIronMixed Function Oxygenasestaurine-alpha-ketoglutarate dioxygenase

Identifiers

PMID21956429
PMCPMC3242413

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.