Evidence map›Paper›PMID 21956104›Full record

ArticleThe Journal of biological chemistry2011

Mutant profilin suppresses mutant actin-dependent mitochondrial phenotype in Saccharomyces cerevisiae.

Kuo-Kuang Wen, Melissa McKane, Ema Stokasimov, Peter A Rubenstein

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Mutant vascular actin is a TAAD misbehaving.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kuo-Kuang WenDepartment of Biochemistry, University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa 52242.
Melissa McKaneDepartment of Biochemistry, University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa 52242.
Ema StokasimovDepartment of Biochemistry, University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa 52242.
Peter A RubensteinDepartment of Biochemistry, University of Iowa Roy J. and Lucille A. Carver College of Medicine, Iowa City, Iowa 52242. Electronic address: peter-rubenstein@uiowa.edu.
University of Iowa · US

Funding

MUTAGENIC STUDY OF YEAST ACTIN CONFORMATIONAL CHANGESR01GM033689 · NIGMS · UNIVERSITY OF IOWA · PI RUBENSTEIN, PETER A. · 1985 to 2010
$3.7M
Biochemical consequences of Deafness-causing actin mutationsR01DC008803 · NIDCD · UNIVERSITY OF IOWA · PI RUBENSTEIN, PETER A. · 2008 to 2012
$1.8M
Biochemical Consequences of Deafness-causing Actin MutationsR55DC008803 · NIDCD · UNIVERSITY OF IOWA · PI RUBENSTEIN, PETER A. · 2007 to 2007
$100k
NIDCD NIH HHS DC8803NIDCD NIH HHS R01 DC008803NIDCD NIH HHS R55 DC008803NIGMS NIH HHS GM33689NIGMS NIH HHS R01 GM033689
6 · The paper itself

Abstract

In the Saccharomyces cerevisiae actin-profilin interface, Ala(167) of the actin barbed end W-loop and His(372) near the C terminus form a clamp around a profilin segment containing residue Arg(81) and Tyr(79). Modeling suggests that altering steric packing in this interface regulates actin activity. An actin A167E mutation could increase interface crowding and alter actin regulation, and A167E does cause growth defects and mitochondrial dysfunction. We assessed whether a profilin Y79S mutation with its decreased mass could compensate for actin A167E crowding and rescue the mutant phenotype. Y79S profilin alone caused no growth defect in WT actin cells under standard conditions in rich medium and rescued the mitochondrial phenotype resulting from both the A167E and H372R actin mutations in vivo consistent with our model. Rescue did not result from effects of profilin on actin nucleotide exchange or direct effects of profilin on actin polymerization. Polymerization of A167E actin was less stimulated by formin Bni1 FH1-FH2 fragment than was WT actin. Addition of WT profilin to mixtures of A167E actin and formin fragment significantly altered polymerization kinetics from hyperbolic to a decidedly more sigmoidal behavior. Substitution of Y79S profilin in this system produced A167E behavior nearly identical to that of WT actin. A167E actin caused more dynamic actin cable behavior in vivo than observed with WT actin. Introduction of Y79S restored cable movement to a more normal phenotype. Our studies implicate the importance of the actin-profilin interface for formin-dependent actin and point to the involvement of formin and profilin in the maintenance of mitochondrial integrity and function.

Indexed as

Mutation, MissenseProtein MultimerizationActinsAmino Acid SubstitutionMitochondriaPhenotypeProfilinsProtein Structure, SecondarySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsActinsProfilinsSaccharomyces cerevisiae Proteins

Identifiers

PMID21956104
PMCPMC3308883
OpenAlexW1995506925

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.