Evidence map›Paper›PMID 21953412›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2011

Molecular characterization of the translocation breakpoints in the Down syndrome mouse model Ts65Dn.

Laura G Reinholdt, Yueming Ding, Griffith J Gilbert, Griffith T Gilbert, Anne Czechanski, Jeffrey P Solzak, Randall J Roper, Mark T Johnson, Leah Rae Donahue, Cathleen Lutz and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 123 papers.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed, 188 citations in OpenAlex.

  1. Article
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  4. Sex-specific developmental phenotypes and their response to neonatalbioRxiv : the preprint server for biology · 2026
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  18. Sex specific emergence of trisomicbioRxiv : the preprint server for biology · 2024
    Article
  19. Article
  20. Article

63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
    Gilbert, Griffith T [corrected to Gilbert, Griffith J]
5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Laura G ReinholdtThe Jackson Laboratory, Genetic Resource Science, ME, 04609, USA. laura.reinholdt@jax.org
Yueming Ding
Griffith J Gilbert
Griffith T Gilbert
Anne Czechanski
Jeffrey P Solzak
Randall J Roper
Mark T Johnson
Leah Rae Donahue
Cathleen Lutz
Muriel T Davisson
Jackson Laboratory · USIndiana University – Purdue University Indianapolis · USRegeneron (United States) · USUniversity of Indianapolis · USUniversity of Michigan–Ann Arbor · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
Genetic basis of the neural crest deficit in Down syndrome miceR15DE021034 · NIDCR · INDIANA UNIVERSITY INDIANAPOLIS · PI ROPER, RANDALL J · 2010 to 2010
$380k
NCI NIH HHS CA34196NCI NIH HHS P30 CA034196NICHD NIH HHS HHSN275201000006CNIDCR NIH HHS DE021034NIDCR NIH HHS R15 DE021034PHS HHS CYTO-01
6 · The paper itself

Abstract

Ts65Dn is a mouse model of Down syndrome: a syndrome that results from chromosome (Chr) 21 trisomy and is associated with congenital defects, cognitive impairment, and ultimately Alzheimer's disease. Ts65Dn mice have segmental trisomy for distal mouse Chr 16, a region sharing conserved synteny with human Chr 21. As a result, this strain harbors three copies of over half of the human Chr 21 orthologs. The trisomic segment of Chr 16 is present as a translocation chromosome (Mmu17(16)), with breakpoints that have not been defined previously. To molecularly characterize the Chrs 16 and 17 breakpoints on the translocation chromosome in Ts65Dn mice, we used a selective enrichment and high-throughput paired-end sequencing approach. Analysis of paired-end reads flanking the Chr 16, Chr 17 junction on Mmu17(16) and de novo assembly of the reads directly spanning the junction provided the precise locations of the Chrs 16 and 17 breakpoints at 84,351,351 and 9,426,822 bp, respectively. These data provide the basis for low-cost, highly efficient genotyping of Ts65Dn mice. More importantly, these data provide, for the first time, complete characterization of gene dosage in Ts65Dn mice.

Indexed as

Disease Models, AnimalTranslocation, GeneticTrisomyAnimalsBase SequenceDown SyndromeFemaleGene DosageGenotypeHigh-Throughput Nucleotide SequencingMaleMiceMice, Inbred C57BLMice, Inbred DBAPolymorphism, Single NucleotideSequence Alignment

Identifiers

PMID21953412
PMCPMC3505986
OpenAlexW2030669013

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.