Evidence map›Paper›PMID 21952825›Full record

ArticleMolecular biology reports2012

Characterization of splice variants of the genes encoding human mitochondrial HMG-CoA lyase and HMG-CoA synthase, the main enzymes of the ketogenesis pathway.

Beatriz Puisac, Mónica Ramos, María Arnedo, Sebastián Menao, María Concepción Gil-Rodríguez, María Esperanza Teresa-Rodrigo, Angeles Pié, Juan Carlos de Karam, Jan-Jaap Wesselink, Ignacio Giménez and 5 more

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Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. SGLT2 Inhibitors and Ketone Metabolism in Heart Failure.Journal of lipid and atherosclerosis · 2022
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. [Mitochondrial 3-hydroxy-3-methylglutaryl CoA synthase deficiency: a case report and literature review].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2018
    Review
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Metabolic biology of 3-methylglutaconic acid-uria: a new perspective.Journal of inherited metabolic disease · 2014
    Review
  17. Article
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Beatriz PuisacUnit of Clinical Genetics and Functional Genomics, Departments of Pharmacology-Physiology and Pediatrics, School of Medicine, University of Zaragoza, C/Domingo Miral s/n, 50009, Zaragoza, Spain.
Mónica Ramos
María Arnedo
Sebastián Menao
María Concepción Gil-Rodríguez
María Esperanza Teresa-Rodrigo
Angeles Pié
Juan Carlos de Karam
Jan-Jaap Wesselink
Ignacio Giménez
Feliciano J Ramos
Nuria Casals
Paulino Gómez-Puertas
Fausto G Hegardt
Juan Pié
Universidad de Zaragoza · ESBiomol Informatics (Spain) · ESUniversidad Autónoma de Madrid · ESUniversitat de Barcelona · ESUniversitat Internacional de Catalunya · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genes HMGCS2 and HMGCL encode the two main enzymes for ketone-body synthesis, mitochondrial HMG-CoA synthase and HMG-CoA lyase. Here, we identify and describe possible splice variants of these genes in human tissues. We detected an alternative transcript of HMGCS2 carrying a deletion of exon 4, and two alternative transcripts of HMGCL with deletions of exons 5 and 6, and exons 5, 6 and 7, respectively. All splice variants maintained the reading frame. However, Western blot studies and overexpression measurements in eukaryotic or prokaryotic cell models did not reveal HL or mHS protein variants. Both genes showed a similar distribution of the inactive variants in different tissues. Surprisingly, the highest percentages were found in tissues where almost no ketone bodies are synthesized: heart, skeletal muscle and brain. Our results suggest that alternative splicing might coordinately block the two main enzymes of ketogenesis in specific human tissues.

Indexed as

Alternative SplicingBiosynthetic PathwaysBlotting, WesternComputational BiologyHEK293 CellsHumansHydroxymethylglutaryl-CoA SynthaseIsoenzymesKetone BodiesMitochondriaOxo-Acid-LyasesProtein Structure, SecondaryReal-Time Polymerase Chain Reaction3-hydroxy-3-methylglutaryl-coenzyme A lyaseHydroxymethylglutaryl-CoA SynthaseIsoenzymesKetone BodiesOxo-Acid-Lyases

Identifiers

PMID21952825
OpenAlexW2106979409

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.