Evidence map›Paper›PMID 21949861›Full record

ArticlePloS one2011

Nucleoporin98-96 function is required for transit amplification divisions in the germ line of Drosophila melanogaster.

Benjamin B Parrott, Yuting Chiang, Alicia Hudson, Angshuman Sarkar, Antoine Guichet, Cordula Schulz

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
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  7. Single-cyst transcriptome analysis ofDevelopment (Cambridge, England) · 2020
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  8. The Journal of biological chemistry · 2020
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  9. Review
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  12. Review
  13. Review
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  15. Nup98 promotes antiviral gene expression to restrict RNA viral infection in Drosophila.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  16. Article
  17. Article
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Benjamin B ParrottDepartment of Cellular Biology, University of Georgia, Athens, Georgia, United States of America.
Yuting Chiang
Alicia Hudson
Angshuman Sarkar
Antoine Guichet
Cordula Schulz
University of Georgia · USBirla Institute of Technology and Science, Pilani - Goa Campus · INHarvard University Press · USInstitut Jacques Monod · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Production of specialized cells from precursors depends on a tightly regulated sequence of proliferation and differentiation steps. In the gonad of Drosophila melanogaster, the daughters of germ line stem cells (GSC) go through precisely four rounds of transit amplification divisions to produce clusters of 16 interconnected germ line cells before entering a stereotypic differentiation cascade. Here we show that animals harbouring a transposon insertion in the center of the complex nucleoporin98-96 (nup98-96) locus had severe defects in the early steps of this developmental program, ultimately leading to germ cell loss and sterility. A phenotypic analysis indicated that flies carrying the transposon insertion, designated nup98-96(2288), had dramatically reduced numbers of germ line cells. In contrast to controls, mutant testes contained many solitary germ line cells that had committed to differentiation as well as abnormally small clusters of two, four or eight differentiating germ line cells. This indicates that mutant GSCs rather differentiated than self-renewed, and that these GSCs and their daughters initiated the differentiation cascade after zero, or less than four rounds of amplification divisions. This phenotype remained unaffected by hyper-activation of signalling pathways that normally result in excessive proliferation of GSCs and their daughters. Expression of wildtype nup98-96 specifically in the germ line cells of mutant animals fully restored development of the GSC lineage, demonstrating that the effect of the mutation is cell-autonomous. Nucleoporins are the structural components of the nucleopore and have also been implicated in transcriptional regulation of specific target genes. The nuclear envelopes of germ cells and general nucleocytoplasmic transport in nup98-96 mutant animals appeared normal, leading us to propose that Drosophila nup98-96 mediates the transport or transcription of targets required for the developmental timing between amplification and differentiation.

Indexed as

AnimalsBlotting, WesternCell DifferentiationDrosophila melanogasterFluorescent Antibody TechniqueGene Expression RegulationGerm CellsGonadsImmunoenzyme TechniquesIn Situ HybridizationMaleMutationNuclear Pore Complex ProteinsSignal TransductionStem Cellsnuclear pore complex protein 96nuclear pore complex protein 98Nuclear Pore Complex Proteins

Identifiers

PMID21949861
PMCPMC3174998
OpenAlexW1971400064

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.