Evidence map›Paper›PMID 21949597›Full record

ArticleG3 (Bethesda, Md.)2011

An SNP-Based Linkage Map for Zebrafish Reveals Sex Determination Loci.

Kevin M Bradley, Joan P Breyer, David B Melville, Karl W Broman, Ela W Knapik, Jeffrey R Smith

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 205 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Meiotic Recombination in Teleosts.Advances in experimental medicine and biology · 2026
    Review
  5. Article
  6. The hybrid history of zebrafish.G3 (Bethesda, Md.) · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Direct male development in chromosomally ZZ zebrafish.Frontiers in cell and developmental biology · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Sexual determination in zebrafish.Cellular and molecular life sciences : CMLS · 2021
    Review
  19. Knockout ofBiology · 2021
    Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kevin M BradleyDepartment of Medicine, Vanderbilt University School of Medicine, Nashville, TN 37232-0275.
Joan P Breyer
David B Melville
Karl W Broman
Ela W Knapik
Jeffrey R Smith
Vanderbilt University · USUniversity of Wisconsin–Madison · US

Funding

Statistical Methods and Software for QTL MappingR01GM074244 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BROMAN, KARL W · 2005 to 2013
$2.3M
Genetic Mapping Resource for ZebrafishR01DK065637 · NIDDK · VANDERBILT UNIVERSITY · PI SMITH, JEFFREY R. · 2003 to 2007
$1.7M
NIDDK NIH HHS R01 DK065637NIGMS NIH HHS R01 GM074244
6 · The paper itself

Abstract

A surprising diversity of mechanisms controls sex determination of vertebrate organisms, even among closely related species. Both genetic and temperature-dependent systems of sex determination have been described in teleost fish. In the common zebrafish model organism, heteromorphic sex chromosomes are not observed, and the potential role of a genetic component of sex determination remains largely unknown. Here we report a genome-wide linkage study of sex determination in zebrafish using a novel SNP genetic map. We identified loci on zebrafish chromosomes 5 (LOD score 7.9) and 16 (LOD score 9.3) governing sex determination as a complex trait, rather than as an XY or ZW genetic system. Each of these loci contains a prominent candidate gene with a conserved role in sex determination across additional species that suggest potential mechanisms of sex determination in zebrafish. The chromosome 5 locus harbors dmrt1, a key gene in sex determination from fruit flies to humans; mutation of the human DMRT1 ortholog is a cause of complete sex reversal of XY individuals. The chromosome 16 locus harbors cyp21a2; mutation of the human CYP21A2 ortholog is one of the more common causes of pseudohermaphroditism. Mutation detection at each of these candidate genes within the zebrafish cross identified hypomorphic variants on the female-associated allele of each locus. The two loci together accounted for 16% of variance of the trait. Interacting environmental cues are likely to be an additional important component of sex determination in zebrafish.

Identifiers

PMID21949597
PMCPMC3178105
OpenAlexW2117919012

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.