Evidence map›Paper›PMID 21949379›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Isovaleryl-homoserine lactone, an unusual branched-chain quorum-sensing signal from the soybean symbiont Bradyrhizobium japonicum.

Andrea Lindemann, Gabriella Pessi, Amy L Schaefer, Margrith E Mattmann, Quin H Christensen, Aline Kessler, Hauke Hennecke, Helen E Blackwell, E Peter Greenberg, Caroline S Harwood

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
12.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 112 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Self-growth suppression inISME communications · 2025
    Article
  5. Self-growth suppression inbioRxiv : the preprint server for biology · 2024
    Article
  6. Soybean-mediated suppression of BjaI/BjaRApplied and environmental microbiology · 2024
    Article
  7. Article
  8. Article
  9. AmBio · 2023
    Article
  10. Article
  11. Article
  12. Pseudomonas aeruginosa Quorum Sensing.Advances in experimental medicine and biology · 2022
    Article
  13. Article
  14. Controlling Synthetic Cell-Cell Communication.Frontiers in molecular biosciences · 2021
    Review
  15. Review
  16. Article
  17. Communication within East Antarctic Soil Bacteria.Applied and environmental microbiology · 2019
    Article
  18. Article
  19. Engineered Orthogonal Quorum Sensing Systems for Synthetic Gene Regulation inFrontiers in bioengineering and biotechnology · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Andrea LindemannDepartment of Microbiology, University of Washington, Seattle, WA 98195, USA.
Gabriella Pessi
Amy L Schaefer
Margrith E Mattmann
Quin H Christensen
Aline Kessler
Hauke Hennecke
Helen E Blackwell
E Peter Greenberg
Caroline S Harwood
University of Washington · USÉcole Polytechnique Fédérale de Lausanne · CHUniversity of Wisconsin–Madison · USUniversity of Illinois Urbana-Champaign · US

Funding

Synthetic Ligands for Modulating Bacterial CommunicationR01AI063326 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI BLACKWELL, HELEN E. · 2006 to 2010
$1.1M
NIAID NIH HHS AI063326NIAID NIH HHS R01 AI063326
6 · The paper itself

Abstract

Many species of Proteobacteria communicate by using LuxI-LuxR-type quorum-sensing systems that produce and detect acyl-homoserine lactone (acyl-HSL) signals. Most of the known signals are straight-chain fatty acyl-HSLs, and evidence indicates that LuxI homologs prefer fatty acid-acyl carrier protein (ACP) over fatty acyl-CoA as the acyl substrate for signal synthesis. Two related LuxI homologs, RpaI and BtaI from Rhodopseudomonas palustris and photosynthetic stem-nodulating bradyrhizobia, direct production of the aryl-HSLs p-coumaroyl-HSL and cinnamoyl-HSL, respectively. Here we report that BjaI from the soybean symbiont Bradyrhizobium japonicum USDA110 is closely related to RpaI and BtaI and catalyzes the synthesis of isovaleryl-HSL (IV-HSL), a branched-chain fatty acyl-HSL. We show that IV-HSL induces expression of bjaI, and in this way IV-HSL functions like many other acyl-HSL quorum-sensing signals. Purified histidine-tagged BjaI was an IV-HSL synthase, which was active with isovaleryl-CoA but not detectably so with isovaleryl-ACP. This suggests that the RpaI-BtaI-BjaI subfamily of acyl-HSL synthases may use CoA- rather than ACP-linked substrates for acyl-HSL synthesis. The bjaI-linked bjaR(1) gene is involved in the response to IV-HSL, and BjaR(1) is sensitive to IV-HSL at concentrations as low as 10 pM. Low but sufficient levels of IV-HSL (about 5 nM) accumulate in B. japonicum culture fluid. The low levels of IV-HSL synthesis have likely contributed to the fact that the quorum-sensing signal from this bacterium has not been described elsewhere.

Indexed as

4-ButyrolactoneAcyl Coenzyme AAmino Acid SequenceBacterial ProteinsBradyrhizobiumCluster AnalysisComputational BiologyGene Expression Regulation, BacterialGlycine maxPhylogenyQuorum SensingReverse Transcriptase Polymerase Chain ReactionSequence AlignmentTranscription Factors4-ButyrolactoneAcyl Coenzyme ABacterial Proteinshomoserine lactoneisovaleryl-coenzyme ALuxI protein, BacteriaTranscription Factors

Identifiers

PMID21949379
PMCPMC3189028
OpenAlexW2102474447

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.