Evidence map›Paper›PMID 21949212›Full record

ArticlePlant physiology2011

Dissecting the role of CHITINASE-LIKE1 in nitrate-dependent changes in root architecture.

Christian Hermans, Silvana Porco, Filip Vandenbussche, Sascha Gille, Jérôme De Pessemier, Dominique Van Der Straeten, Nathalie Verbruggen, Daniel R Bush

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  7. A NaFrontiers in plant science · 2020
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  8. Frontiers in plant science · 2019
    Article
  9. Review
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  12. Article
  13. Article
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Christian HermansLaboratory of Plant Physiology and Molecular Genetics, Université Libre de Bruxelles, B-1050 Brussels, Belgium. chermans@ulb.ac.be
Silvana Porco
Filip Vandenbussche
Sascha Gille
Jérôme De Pessemier
Dominique Van Der Straeten
Nathalie Verbruggen
Daniel R Bush
Energy Biosciences Institute · USUniversity of California, Berkeley · USUniversité Libre de Bruxelles · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The root phenotype of an Arabidopsis (Arabidopsis thaliana) mutant of CHITINASE-LIKE1 (CTL1), called arm (for anion-related root morphology), was previously shown to be conditional on growth on high nitrate, chloride, or sucrose. Mutants grown under restrictive conditions displayed inhibition of primary root growth, radial swelling, proliferation of lateral roots, and increased root hair density. We found here that the spatial pattern of CTL1 expression was mainly in the root and root tips during seedling development and that the protein localized to the cell wall. Fourier-transform infrared microspectroscopy of mutant root tissues indicated differences in spectra assigned to linkages in cellulose and pectin. Indeed, root cell wall polymer composition analysis revealed that the arm mutant contained less crystalline cellulose and reduced methylesterification of pectins. We also explored the implication of growth regulators on the phenotype of the mutant response to the nitrate supply. Exogenous abscisic acid application inhibited more drastically primary root growth in the arm mutant but failed to repress lateral branching compared with the wild type. Cytokinin levels were higher in the arm root, but there were no changes in mitotic activity, suggesting that cytokinin is not directly involved in the mutant phenotype. Ethylene production was higher in arm but inversely proportional to the nitrate concentration in the medium. Interestingly, eto2 and eto3 ethylene overproduction mutants mimicked some of the conditional root characteristics of the arm mutant on high nitrate. Our data suggest that ethylene may be involved in the arm mutant phenotype, albeit indirectly, rather than functioning as a primary signal.

Indexed as

Abscisic AcidArabidopsisArabidopsis ProteinsCell WallEthylenesGene Expression Regulation, PlantGlycoside HydrolasesMutationNitratesPlant RootsPlants, Genetically ModifiedPromoter Regions, GeneticProtein TransportSeedlingsSpectroscopy, Fourier Transform InfraredSubcellular FractionsAbscisic AcidArabidopsis ProteinsCTL1 protein, ArabidopsisethyleneEthylenesGlycoside HydrolasesNitrates

Identifiers

PMID21949212
PMCPMC3252165
OpenAlexW2055641483

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.