Evidence map›Paper›PMID 21948044›Full record

ArticleMicrobiology (Reading, England)2011

The phosphotransferase VanU represses expression of four qrr genes antagonizing VanO-mediated quorum-sensing regulation in Vibrio anguillarum.

Barbara Weber, Kristoffer Lindell, Samir El Qaidi, Erik Hjerde, Nils-Peder Willassen, Debra L Milton

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Regulation of biofilm formation by non-coding RNA in prokaryotes.Current research in pharmacology and drug discovery · 2023
    Review
  2. Article
  3. Diversification ofFrontiers in microbiology · 2019
    Article
  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Barbara WeberDepartment of Molecular Biology, Umeå Centre for Microbial Research (UCMR), Umeå University, Umeå SE-901 87, Sweden.
Kristoffer LindellDepartment of Molecular Biology, Umeå Centre for Microbial Research (UCMR), Umeå University, Umeå SE-901 87, Sweden.
Samir El QaidiDepartment of Molecular Biology, Umeå Centre for Microbial Research (UCMR), Umeå University, Umeå SE-901 87, Sweden.
Erik HjerdeDepartment of Chemistry, Faculty of Science and Technology, University of Tromsø, Tromsø 9037, Norway.
Nils-Peder WillassenDepartment of Chemistry, Faculty of Science and Technology, University of Tromsø, Tromsø 9037, Norway.
Debra L MiltonDepartment of Molecular Biology, Umeå Centre for Microbial Research (UCMR), Umeå University, Umeå SE-901 87, Sweden.
Umeå University · SEUiT The Arctic University of Norway · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio anguillarum utilizes quorum sensing to regulate stress responses required for survival in the aquatic environment. Like other Vibrio species, V. anguillarum contains the gene qrr1, which encodes the ancestral quorum regulatory RNA Qrr1, and phosphorelay quorum-sensing systems that modulate the expression of small regulatory RNAs (sRNAs) that destabilize mRNA encoding the transcriptional regulator VanT. In this study, three additional Qrr sRNAs were identified. All four sRNAs were positively regulated by σ(54) and the σ(54)-dependent response regulator VanO, and showed a redundant activity. The Qrr sRNAs, together with the RNA chaperone Hfq, destabilized vanT mRNA and modulated expression of VanT-regulated genes. Unexpectedly, expression of all four qrr genes peaked at high cell density, and exogenously added N-acylhomoserine lactone molecules induced expression of the qrr genes at low cell density. The phosphotransferase VanU, which phosphorylates and activates VanO, repressed expression of the Qrr sRNAs and stabilized vanT mRNA. A model is presented proposing that VanU acts as a branch point, aiding cross-regulation between two independent phosphorelay systems that activate or repress expression of the Qrr sRNAs, giving flexibility and precision in modulating VanT expression and inducing a quorum-sensing response to stresses found in a constantly changing aquatic environment.

Indexed as

Gene Expression Regulation, BacterialQuorum SensingDNA, BacterialMicroRNAsModels, BiologicalMolecular Sequence DataPhosphotransferasesRepressor ProteinsSequence Analysis, DNATranscription FactorsVibrioDNA, BacterialMicroRNAsPhosphotransferasesRepressor ProteinsTranscription Factors

Identifiers

PMID21948044
PMCPMC3352281
OpenAlexW2122114964

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.