Evidence map›Paper›PMID 21947884›Full record

ArticleMolecular biology reports2012

Structural characterization of plant defensin protein superfamily.

Emma W Gachomo, Jose C Jimenez-Lopez, Adéchola Pierre Polycarpe Kayodé, Lamine Baba-Moussa, Simeon O Kotchoni

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Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Antimicrobial Peptides from Plants.Pharmaceuticals (Basel, Switzerland) · 2015
    Review
  6. Article
  7. Article
  8. Are ticks venomous animals?Frontiers in zoology · 2014
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Emma W GachomoDepartment of Biology, Rutgers University, 315 Penn St., Camden, NJ 08102, USA.
Jose C Jimenez-Lopez
Adéchola Pierre Polycarpe Kayodé
Lamine Baba-Moussa
Simeon O Kotchoni
Rutgers, The State University of New Jersey · USEstación Experimental del Zaidín · ESLaboratoire de Microbiologie et Génétique Moléculaires · FRUniversité d'Abomey-Calavi · BJ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant defensins represent a major innate immune protein superfamily with strong inhibitory effects on infectious diseases of humans, antifungal/antibacterial activities, proteinase and insect amylase inhibitory activities. They are generally defined by their conserved cysteine scaffold with α-helix and triple strand anti parallel β-sheet connected to the scaffold. With the genome of more plant species being fully sequenced, significant information about newly sequenced defensin proteins has been revealed. In this paper, we identify members of defensin protein families across plant species and use protein-modeling-based structural reconstitution to reveal specific three dimensional hidden features of plant defensins mediating defense responses and other interesting biological activities in plants. Our data revealed that plant defensins are structurally similar to their insect counterparts despite the low amino acid sequence similarity between these two organisms. The molecular and structural relationship among plant defensins and defensins from other species is discussed.

Indexed as

Multigene FamilyAmino Acid SequenceAnti-Infective AgentsConserved SequenceDefensinsEvolution, MolecularModels, MolecularMolecular Sequence DataPhylogenyPlant ProteinsPlantsProtein Structure, SecondarySequence Homology, Amino AcidAnti-Infective AgentsDefensinsPlant Proteins

Identifiers

PMID21947884
OpenAlexW2095231800

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.