Evidence map›Paper›PMID 21947611›Full record

ArticleJournal of fluorescence2012

Analysis of lanthanide-induced conformational change of the C-terminal domain on centrin.

Ya-Qin Zhao, Jun Yan, Li Song, Ya-Nan Feng, Ai-Hua Liang, Bin-Sheng Yang

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of fluorescence, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 8 citations in OpenAlex.

  1. The biochemical effect of Ser166 phosphorylation on Euplotes octocarinatus centrin.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ya-Qin ZhaoKey Laboratory of Chemical Biology and Molecular Engineering of Ministry of Education, Institute of Molecular Science, Shanxi University, Taiyuan, 030006, China.
Jun Yan
Li Song
Ya-Nan Feng
Ai-Hua Liang
Bin-Sheng Yang
Shanxi University · CNShanxi University of Traditional Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Centrin, an EF-hand calcium-binding protein with high homology to calmodulin (CaM), is an essential component of microtubule-organizing center (MTOC). Lanthanide (Ln) ions can improve the stability, increase the amount and enhance the orderliness of microtubules, which are components of cytoskeleton. In order to investigate the structural basis of Ln ions on enhancing orderliness of microtubules, we characterized the binding properties of Ln ions with the isolated C-terminal domain of the Euplotes centrin (C-EoCen). Results suggested that Ln ions may occupy the canonical Ca(2+) binding sites on C-EoCen with middle affinity. Near- and far-UV CD spectra of C-EoCen displayed pronounced differences before and after additing Ln ions. The asymmetry of microenvironments of Phe on C-EoCen was changed. Using 2-p-toluidinylnaphthalene-6- sulfonate (TNS) as probe, Ln ions induced C-EoCen to undergo conformational changes from closed state to open state, resulting in exposing hydrophobic patches to external environments. Ln ions have more obvious effect on the conformation of centrin than Ca(2+). The differences found in the interactions of centrin binding with Ln ions/Ca(2+) maybe provide some insights for structural basis of centrin functions in vivo.

Indexed as

Amino Acid SequenceCalcium-Binding ProteinsChromosomal Proteins, Non-HistoneEuplotesHydrophobic and Hydrophilic InteractionsLanthanoid Series ElementsLigandsMolecular Sequence DataPhenolsProtein Structure, TertiaryProtozoan ProteinsSpectrum AnalysisSulfoxidesXylenesCalcium-Binding ProteinscaltractinChromosomal Proteins, Non-HistoneLanthanoid Series ElementsLigandsPhenolsProtozoan ProteinsSulfoxidesXylenesxylenol orange

Identifiers

PMID21947611
OpenAlexW2050741580

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.