Evidence map›Paper›PMID 21946276›Full record

ArticleNature chemical biology2011

On-resin N-methylation of cyclic peptides for discovery of orally bioavailable scaffolds.

Tina R White, Chad M Renzelman, Arthur C Rand, Taha Rezai, Cayla M McEwen, Vladimir M Gelev, Rushia A Turner, Roger G Linington, Siegfried S F Leung, Amit S Kalgutkar and 7 more

Abstract read
In one paragraph

Article in Nature chemical biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 126 papers.

0numbers the graph read from it
0cells of the map it votes in
126citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

126 citing papers in PubMed, 376 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Late-Stage Functionalization of Peptides on the Solid Phase.Angewandte Chemie (International ed. in English) · 2026
    Review
  6. Article
  7. Article
  8. Making Blank Faces Expressive: Chemical Approaches to the Modification of Chemically Inert Peptides.Journal of peptide science : an official publication of the European Peptide Society · 2026
    Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Macrocyclic Peptides Containing an Imidazopyridinium (IPbioRxiv : the preprint server for biology · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

66 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Tina R WhiteDepartment of Chemistry, University of California Santa Cruz, Santa Cruz, California, USA.
Chad M Renzelman
Arthur C Rand
Taha Rezai
Cayla M McEwen
Vladimir M Gelev
Rushia A Turner
Roger G Linington
Siegfried S F Leung
Amit S Kalgutkar
Jonathan N Bauman
Yizhong Zhang
Spiros Liras
David A Price
Alan M Mathiowetz
Matthew P Jacobson
R Scott Lokey
University of California, Santa Cruz · USPfizer (United States) · USUniversity of California, San Francisco · USBeth Israel Deaconess Medical Center · USThermo Fisher Scientific (Israel) · IL

Funding

Synthesis and discovery of biologically active cell-permeable cyclic peptidesR01GM084530 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI LOKEY, ROBERT SCOTT · 2009 to 2012
$1.3M
Understanding, Predicting, and Engineering Membrane PermeabilityR01GM086602 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JACOBSON, MATTHEW P · 2009 to 2012
$1.0M
NIGMS NIH HHS GM084530-06NIGMS NIH HHS R01 GM084530NIGMS NIH HHS R01 GM086602NIGMS NIH HHS R01-GM086602
6 · The paper itself

Abstract

Backbone N-methylation is common among peptide natural products and has a substantial impact on both the physical properties and the conformational states of cyclic peptides. However, the specific impact of N-methylation on passive membrane diffusion in cyclic peptides has not been investigated systematically. Here we report a method for the selective, on-resin N-methylation of cyclic peptides to generate compounds with drug-like membrane permeability and oral bioavailability. The selectivity and degree of N-methylation of the cyclic peptide was dependent on backbone stereochemistry, suggesting that conformation dictates the regiochemistry of the N-methylation reaction. The permeabilities of the N-methyl variants were corroborated by computational studies on a 1,024-member virtual library of N-methyl cyclic peptides. One of the most permeable compounds, a cyclic hexapeptide (molecular mass = 755 Da) with three N-methyl groups, showed an oral bioavailability of 28% in rat.

Indexed as

AnimalsBiological AvailabilityChemistry, PharmaceuticalCombinatorial Chemistry TechniquesComputer SimulationDrug DiscoveryMaleMethylationMolecular StructurePeptides, CyclicRatsStructure-Activity RelationshipPeptides, Cyclic

Identifiers

PMID21946276
PMCPMC3210067
OpenAlexW2050991123

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.