Evidence map›Paper›PMID 21945094›Full record

ArticleDNA repair2011

PIF1 disruption or NBS1 hypomorphism does not affect chromosome healing or fusion resulting from double-strand breaks near telomeres in murine embryonic stem cells.

Gloria E Reynolds, Qing Gao, Douglas Miller, Bryan E Snow, Lea A Harrington, John P Murnane

Abstract read
In one paragraph

Article in DNA repair, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Gloria E ReynoldsDepartment of Radiation Oncology, University of California San Francisco, 2340 Sutter Street, San Francisco, CA 94143-1331, United States.
Qing Gao
Douglas Miller
Bryan E Snow
Lea A Harrington
John P Murnane
University of California, San Francisco · USMassachusetts Institute of Technology · USOntario Institute for Cancer Research · CAWellcome Centre for Cell Biology · GB

Funding

MECHANISMS OF FORMATION OF TERMINAL DELETIONSR01ES008427 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MURNANE, JOHN P. · 1997 to 2007
$2.5M
AGING, DISEASE, AND DRUGS ON DIGITALIS SENSITIVITYR01AG002398 · NIA · MICHIGAN STATE UNIVERSITY · PI BRODY, THEODORE M. · 1985 to 1988
–
NIA NIH HHS R01 AG02398NIEHS NIH HHS R01 ES008427
6 · The paper itself

Abstract

Telomerase serves to maintain telomeric repeat sequences at the ends of chromosomes. However, telomerase can also add telomeric repeat sequences at DNA double-strand breaks (DSBs), a process called chromosome healing. Here, we employed a method of inducing DSBs near telomeres to query the role of two proteins, PIF1 and NBS1, in chromosome healing in mammalian cells. PIF1 was investigated because the PIF1 homolog in Saccharomyces cerevisiae inhibits chromosome healing, as shown by a 1000-fold increase in chromosome in PIF1-deficient cells. NBS1 was investigated because the functional homolog of NBS1 in S. cerevisiae, Xrs2, is part of the Mre11/Rad50/Xrs2 complex that is required for chromosome healing due to its role in the processing of DSBs and recruitment of telomerase. We found that disruption of mPif1 had no detectable effect on the frequency of chromosome healing at DSBs near telomeres in murine embryonic stem cells. Moreover, the Nbs1(ΔB) hypomorph, which is defective in the processing of DSBs, also had no detectable effect on the frequency of chromosome healing, DNA degradation, or gross chromosome rearrangements (GCRs) that result from telomeric DSBs. Although we cannot rule out small changes in chromosome healing using this system, it is clear from our results that knockout of PIF1 or the Nbs1(ΔB) hypomorph does not result in large differences in chromosome healing in murine cells. These results represent the first genetic assessment of the role of these proteins in chromosome healing in mammals, and suggest that murine cells have evolved mechanisms to ensure the functional redundancy of Pif1 or Nbs1 in the regulation of chromosome healing.

Indexed as

Chromosome AberrationsDNA Breaks, Double-StrandedAnimalsBase SequenceCell Cycle ProteinsDNA-Binding ProteinsDNA HelicasesEmbryonic Stem CellsFemaleGene Knockout TechniquesMaleMiceMice, TransgenicMolecular Sequence DataNuclear ProteinsSequence AlignmentCell Cycle ProteinsDNA-Binding ProteinsDNA HelicasesNijmegen breakage syndrome 1 protein, mouseNuclear ProteinsPif1 protein, mouseTelomerase

Identifiers

PMID21945094
PMCPMC3208378
OpenAlexW1999058501

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.