ArticleBMC genomics2011
Comparative transcriptomes profiling of photoperiod-sensitive male sterile rice Nongken 58S during the male sterility transition between short-day and long-day.
Article in BMC genomics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed.
- The regulatory role of CARBON STARVED ANTHER-mediated photoperiod-dependent male fertility in rice.Plant physiology · 2022Article
- Characteristics of Fertility Transition Response to the Cumulative Effective Low Temperature in a Two-Line Male Sterile Rice Cultivar.Rice (New York, N.Y.) · 2021Article
- Article
- RNA Sequencing Reveals Rice Genes Involved in Male Reproductive Development under Temperature Alteration.Plants (Basel, Switzerland) · 2021Article
- Gene characterization and molecular pathway analysis of reverse thermosensitive genic male sterility in eggplant (Horticulture research · 2019Article
- Article
- Genome-wide comparative transcriptome analysis of CMS-D2 and its maintainer and restorer lines in upland cotton.BMC genomics · 2017Article
- TGMS in Rapeseed (Frontiers in plant science · 2017Article
- Genome-wide analysis of DNA methylation in photoperiod- and thermo-sensitive male sterile rice Peiai 64S.BMC genomics · 2015Article
- Genes associated with thermosensitive genic male sterility in rice identified by comparative expression profiling.BMC genomics · 2014Article
- The phenotypic predisposition of the parent in F1 hybrid is correlated with transcriptome preference of the positive general combining ability parent.BMC genomics · 2014Article
- Global RNA sequencing reveals that genotype-dependent allele-specific expression contributes to differential expression in rice F1 hybrids.BMC plant biology · 2013Article
- The endoplasmic reticulum stress induced by highly expressed OsrAAT reduces seed size via pre-mature programmed cell death.Plant molecular biology · 2013Article
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8 authors.
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Abstract
backgroundPhotoperiod-sensitive genic male sterile (PGMS) rice, Nongken 58S, was discovered in 1973. It has been widely used for the production of hybrid rice, and great achievements have been made in improving rice yields. However, the mechanism of the male sterility transition in PGMS rice remains to be determined.
resultsTo investigate the transcriptome during the male sterility transition in PGMS rice, the transcriptome of Nongken 58S under short-day (SD) and long-day (LD) at the glume primordium differentiation and pistil/stamen primordium forming stages was compared. Seventy-three and 128 differentially expressed genes (DEGs) were identified at the glume primordium differentiation and pistil/stamen primordium forming stages, respectively. Five and 22 genes were markedly up-regulated (≥ 5-fold), and two and five genes were considerably down-regulated (≥ 5-fold) under SD during the male sterility transition. Gene ontology annotation and pathway analysis revealed that four biological processes and the circadian rhythms and the flowering pathways coordinately regulated the male sterility transition. Further quantitative PCR analysis demonstrated that the circadian rhythms of OsPRR1, OsPRR37, OsGI, Hd1, OsLHY and OsDof in leaves were obviously different between Nongken 58S and Nongken 58 under LD conditions. Moreover, both OsPRR37 and Hd1 in the inflorescence displayed differences between Nongken 58S and Nongken 58 under both LD and SD conditions.
conclusionThe results presented here indicate that the transcriptome in Nongken 58S was significantly suppressed under LD conditions. Among these DEGs, the circadian rhythm and the flowering pathway were involved in the male sterility transition. Furthermore, these pathways were coordinately involved in the male sterility transition in PGMS rice.
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