Evidence map›Paper›PMID 21933419›Full record

ArticleBMC microbiology2011

Clonal diversity of the glutamate dehydrogenase gene in Giardia duodenalis from Thai isolates: evidence of genetic exchange or mixed infections?

Suradej Siripattanapipong, Saovanee Leelayoova, Mathirut Mungthin, R C Andrew Thompson, Parima Boontanom, Wilai Saksirisampant, Peerapan Tan-Ariya

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Prevalence of intestinal parasites with molecular detection and identification ofJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2021
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  7. Genetic Diversity of the Flavohemoprotein Gene ofInfection and drug resistance · 2020
    Article
  8. Article
  9. Observational
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Suradej SiripattanapipongDepartment of Microbiology, Faculty of Science, Mahidol University, Rama VI Rd,, Bangkok, 10400, Thailand. scptn@mahidol.ac.th
Saovanee Leelayoova
Mathirut Mungthin
R C Andrew Thompson
Parima Boontanom
Wilai Saksirisampant
Peerapan Tan-Ariya
Mahidol University · THPhramongkutklao Hospital · THChulalongkorn University · THMurdoch University · AUPhramongkutklao College of Medicine

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe glutamate dehydrogenase gene (gdh) is one of the most popular and useful genetic markers for the genotypic analysis of Giardia duodenalis (syn. G. lamblia, G. intestinalis), the protozoan that widely causes enteric disease in humans. To determine the distribution of genotypes of G. duodenalis in Thai populations and to investigate the extent of sequence variation at this locus, 42 fecal samples were collected from 3 regions of Thailand i.e., Central, Northern, and Eastern regions. All specimens were analyzed using PCR-based genotyping and recombinant subcloning methods.

resultsThe results showed that the prevalence of assemblages A and B among these populations was approximately equal, 20 (47.6%) and 22 (52.4%), respectively. Sequence analysis revealed that the nucleotide diversity of assemblage B was significantly greater than that in assemblage A. Among all assemblage B positive specimens, the allelic sequence divergence within isolates was detected. Nine isolates showed mixed alleles, ranged from three to nine distinct alleles per isolate. Statistical analysis demonstrated the occurrence of genetic recombination within subassemblages BIII and BIV was likely.

conclusionThis study supports increasing evidence that G. duodenalis has the potential for genetic exchange.

Indexed as

Genetic VariationRecombination, GeneticAllelesChild, PreschoolCoinfectionFecesFemaleGiardia lambliaGiardiasisGlutamate DehydrogenaseHumansInfantMaleMolecular Sequence DataPhylogenyThailandGlutamate Dehydrogenase

Identifiers

PMID21933419
PMCPMC3191338
OpenAlexW2059445354

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.