Evidence map›Paper›PMID 21931660›Full record

ArticlePloS one2011

In vivo RNAi screen reveals neddylation genes as novel regulators of Hedgehog signaling.

Juan Du, Junzheng Zhang, Ying Su, Min Liu, Jason K Ospina, Shengyuan Yang, Alan Jian Zhu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  7. Genetic mapping ofmicroPublication biology · 2022
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Juan DuSchool of Life Sciences, Peking University, Beijing, China.
Junzheng Zhang
Ying Su
Min Liu
Jason K Ospina
Shengyuan Yang
Alan Jian Zhu
Cleveland Clinic Lerner College of Medicine · US

Funding

TRAINING IN NORMAL AND ABNORMAL DEVELOPMENTT32HD007104 · NICHD · CASE WESTERN RESERVE UNIVERSITY · PI HARTE, PETER J. · 1985 to 2010
$3.5M
Reversible phosphorylation in Hedgehog signalingR01GM085175 · NIGMS · CLEVELAND CLINIC LERNER COM-CWRU · PI ZHU, ALAN · 2009 to 2013
$1.5M
NICHD NIH HHS T32 HD007104NICHD NIH HHS T32HD007104NIGMS NIH HHS R01 GM085175NIGMS NIH HHS R01GM085175
6 · The paper itself

Abstract

Hedgehog (Hh) signaling is highly conserved in all metazoan animals and plays critical roles in many developmental processes. Dysregulation of the Hh signaling cascade has been implicated in many diseases, including cancer. Although key components of the Hh pathway have been identified, significant gaps remain in our understanding of the regulation of individual Hh signaling molecules. Here, we report the identification of novel regulators of the Hh pathway, obtained from an in vivo RNA interference (RNAi) screen in Drosophila. By selectively targeting critical genes functioning in post-translational modification systems utilizing ubiquitin (Ub) and Ub-like proteins, we identify two novel genes (dUba3 and dUbc12) that negatively regulate Hh signaling activity. We provide in vivo and in vitro evidence illustrating that dUba3 and dUbc12 are essential components of the neddylation pathway; they function in an enzyme cascade to conjugate the ubiquitin-like NEDD8 modifier to Cullin proteins. Neddylation activates the Cullin-containing ubiquitin ligase complex, which in turn promotes the degradation of Cubitus interruptus (Ci), the downstream transcription factor of the Hh pathway. Our study reveals a conserved molecular mechanism of the neddylation pathway in Drosophila and sheds light on the complex post-translational regulations in Hh signaling.

Indexed as

RNA InterferenceSignal TransductionAmino Acid SequenceAnimalsCells, CulturedDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGene Expression Regulation, DevelopmentalHedgehog ProteinsImmunoblottingIn Situ HybridizationLarvaMolecular Sequence DataProteasome Endopeptidase ComplexReverse Transcriptase Polymerase Chain Reactionci protein, DrosophilaDNA-Binding ProteinsDrosophila ProteinsHedgehog ProteinsProteasome Endopeptidase ComplexTranscription FactorsUba3 protein, DrosophilaUbcE2M protein, DrosophilaUbiquitin-Activating EnzymesUbiquitin-Conjugating Enzymes

Identifiers

PMID21931660
PMCPMC3169580
OpenAlexW2072156547

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.