Evidence map›Paper›PMID 21931166›Full record

ArticleThe Journal of biological chemistry2011

Structure of human Na+/H+ exchanger NHE1 regulatory region in complex with calmodulin and Ca2+.

Stefan Köster, Tea Pavkov-Keller, Werner Kühlbrandt, Özkan Yildiz

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 54 citations in OpenAlex.

  1. A novel SLC9A1 mutation causes cerebellar ataxia.Journal of human genetics · 2018
    Trial
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. ATP-mediated increase in HJournal of neurophysiology · 2024
    Article
  8. Binding by calmodulin is coupled to transient unfolding of the third FF domain of Prp40A.Protein science : a publication of the Protein Society · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Dynamic NaeLife · 2021
    Article
  13. Calmodulin complexes with brain and muscle creatine kinase peptides.Current research in structural biology · 2021
    Article
  14. Article
  15. Review
  16. Proteins with calmodulin-like domains: structures and functional roles.Cellular and molecular life sciences : CMLS · 2019
    Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

Stefan KösterDepartment of Structural Biology, Max Planck Institute of Biophysics, Max-von-Laue Str. 3, 60438 Frankfurt am Main, Germany.
Tea Pavkov-Keller
Werner Kühlbrandt
Özkan Yildiz
Max Planck Institute of Biophysics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ubiquitous mammalian Na(+)/H(+) exchanger NHE1 has critical functions in regulating intracellular pH, salt concentration, and cellular volume. The regulatory C-terminal domain of NHE1 is linked to the ion-translocating N-terminal membrane domain and acts as a scaffold for signaling complexes. A major interaction partner is calmodulin (CaM), which binds to two neighboring regions of NHE1 in a strongly Ca(2+)-dependent manner. Upon CaM binding, NHE1 is activated by a shift in sensitivity toward alkaline intracellular pH. Here we report the 2.23 Å crystal structure of the NHE1 CaM binding region (NHE1(CaMBR)) in complex with CaM and Ca(2+). The C- and N-lobes of CaM bind the first and second helix of NHE1(CaMBR), respectively. Both the NHE1 helices and the Ca(2+)-bound CaM are elongated, as confirmed by small angle x-ray scattering analysis. Our x-ray structure sheds new light on the molecular mechanisms of the phosphorylation-dependent regulation of NHE1 and enables us to propose a model of how Ca(2+) regulates NHE1 activity.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCalciumCalmodulinCation Transport ProteinsCell LineCrystallography, X-RayHumansMiceMolecular Sequence DataPhosphorylationProtein BindingProtein Processing, Post-TranslationalProtein Structure, TertiaryRatsCalciumCalmodulinCation Transport ProteinsSLC9A1 protein, humanSodium-Hydrogen Exchanger 1Sodium-Hydrogen Exchangers

Identifiers

PMID21931166
PMCPMC3220496
OpenAlexW2141829395

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.