Evidence map›Paper›PMID 21930795›Full record

ArticleMolecular and cellular biology2011

Differential role of Nkx2-5 in activation of the atrial natriuretic factor gene in the developing versus failing heart.

Sonisha A Warren, Ryota Terada, Laura E Briggs, Colleen T Cole-Jeffrey, Wei-Ming Chien, Tsugio Seki, Ellen O Weinberg, Thomas P Yang, Michael T Chin, Jörg Bungert and 1 more

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Extracellular Matrix Disparities in anFrontiers in cardiovascular medicine · 2020
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Myocardial plasticity: cardiac development, regeneration and disease.Current opinion in genetics & development · 2016
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Regulation of chromatin structure in the cardiovascular system.Circulation journal : official journal of the Japanese Circulation Society · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Sonisha A WarrenDepartment of Physiology and Functional Genomics, University of Florida College of Medicine, Gainesville, Florida 32610-0274, USA.
Ryota Terada
Laura E Briggs
Colleen T Cole-Jeffrey
Wei-Ming Chien
Tsugio Seki
Ellen O Weinberg
Thomas P Yang
Michael T Chin
Jörg Bungert
Hideko Kasahara
University of Florida · USUniversity of Washington · USAugusta University Health · USBoston Medical Center · USFlorida College · US

Funding

Nkx2.5-dependent pathways in postnatal cardiomyocytesR01HL081577 · NHLBI · UNIVERSITY OF FLORIDA · PI KASAHARA, HIDEKO · 2005 to 2009
$1.9M
NHLBI NIH HHS HL081577NHLBI NIH HHS R01 HL081577
6 · The paper itself

Abstract

Atrial natriuretic factor (ANF) is abundantly expressed in atrial cardiomyocytes throughout ontogeny and in ventricular cardiomyocytes in the developing heart. However, during cardiac failure and hypertrophy, ANF expression can reappear in adult ventricular cardiomyocytes. The transcription factor Nkx2-5 is one of the major transactivators of the ANF gene in the developing heart. We identified Nkx2-5 binding at three 5' regulatory elements (kb -34, -31, and -21) and at the proximal ANF promoter by ChIP assay using neonatal mouse cardiomyocytes. 3C analysis revealed close proximity between the distal elements and the promoter region. A 5.8-kb fragment consisting of these elements transactivated a reporter gene in vivo recapitulating endogenous ANF expression, which was markedly reduced in tamoxifen-inducible Nkx2-5 gene knockout mice. However, expression of a reporter gene was increased and expanded toward the outer compact layer in the absence of the transcription repressor Hey2, similar to endogenous ANF expression. Functional Nkx2-5 and Hey2 binding sites separated by 59 bp were identified in the -34 kb element in neonatal cardiomyocytes. In adult hearts, this fragment did not respond to pressure overload, and ANF was induced in the absence of Nkx2-5. These results demonstrate that Nkx2-5 and its responsive cis-regulatory DNA elements are essential for ANF expression selectively in the developing heart.

Indexed as

AnimalsAtrial Natriuretic FactorBasic Helix-Loop-Helix ProteinsBinding SitesCell DifferentiationDNA-Binding ProteinsGene Expression Regulation, DevelopmentalHeartHeart FailureHomeobox Protein Nkx-2.5Homeodomain ProteinsMiceMice, KnockoutMyocardiumMyocytes, CardiacPromoter Regions, GeneticAtrial Natriuretic FactorBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsHey2 protein, mouseHomeobox Protein Nkx-2.5Homeodomain ProteinsNkx2-5 protein, mouseRepressor ProteinsTranscription Factors

Identifiers

PMID21930795
PMCPMC3209251
OpenAlexW1990242222

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.