Evidence map›Paper›PMID 21930792›Full record

ArticleMolecular and cellular biology2011

SCIMP, a transmembrane adaptor protein involved in major histocompatibility complex class II signaling.

Peter Draber, Ivana Vonkova, Ondrej Stepanek, Matous Hrdinka, Marketa Kucova, Tereza Skopcova, Pavel Otahal, Pavla Angelisova, Vaclav Horejsi, Mandy Yeung and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 64 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Peter DraberInstitute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague 14220, Czech Republic.
Ivana Vonkova
Ondrej Stepanek
Matous Hrdinka
Marketa Kucova
Tereza Skopcova
Pavel Otahal
Pavla Angelisova
Vaclav Horejsi
Mandy Yeung
Arthur Weiss
Tomas Brdicka
Czech Academy of Sciences, Institute of Molecular Genetics · CZCzech Academy of Sciences · CZHoward Hughes Medical Institute · USUniversity of California, San Francisco · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Formation of the immunological synapse between an antigen-presenting cell (APC) and a T cell leads to signal generation in both cells involved. In T cells, the lipid raft-associated transmembrane adaptor protein LAT plays a central role. Its phosphorylation is a crucial step in signal propagation, including the calcium response and mitogen-activated protein kinase activation, and largely depends on its association with the SLP76 adaptor protein. Here we report the discovery of a new palmitoylated transmembrane adaptor protein, termed SCIMP. SCIMP is expressed in B cells and other professional APCs and is localized in the immunological synapse due to its association with tetraspanin-enriched microdomains. In B cells, it is constitutively associated with Lyn kinase and becomes tyrosine phosphorylated after major histocompatibility complex type II (MHC-II) stimulation. When phosphorylated, SCIMP binds to the SLP65 adaptor protein and also to the inhibitory kinase Csk. While the association with SLP65 initiates the downstream signaling cascades, Csk binding functions as a negative regulatory loop. The results suggest that SCIMP is involved in signal transduction after MHC-II stimulation and therefore serves as a regulator of antigen presentation and other APC functions.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid SequenceAntigen PresentationAntigen-Presenting CellsB-LymphocytesCSK Tyrosine-Protein KinaseHEK293 CellsHistocompatibility Antigens Class IIHumansImmunological SynapsesLymphocyte ActivationMembrane MicrodomainsMembrane ProteinsMitogen-Activated Protein KinasesMolecular Sequence DataPhosphoproteinsAdaptor Proteins, Signal TransducingB cell linker proteinCSK protein, humanCSK Tyrosine-Protein KinaseHistocompatibility Antigens Class IIlyn protein-tyrosine kinaseMembrane ProteinsMitogen-Activated Protein KinasesPhosphoproteinsProtein-Tyrosine KinasesRNA, Small InterferingSCIMP protein, humanSLP-76 signal Transducing adaptor proteinssrc-Family Kinases

Identifiers

PMID21930792
PMCPMC3209250
OpenAlexW2138329729

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.