Evidence map›Paper›PMID 21926169›Full record

ArticleThe Journal of biological chemistry2011

Inhibitor of apoptosis (IAP)-like protein lacks a baculovirus IAP repeat (BIR) domain and attenuates cell death in plant and animal systems.

Woe Yeon Kim, Sun Yong Lee, Young Jun Jung, Ho Byoung Chae, Ganesh M Nawkar, Mi Rim Shin, Sun Young Kim, Jin Ho Park, Chang Ho Kang, Yong Hun Chi and 6 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Woe Yeon KimDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Sun Yong LeeDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Young Jun JungDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Ho Byoung ChaeDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Ganesh M NawkarDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Mi Rim ShinDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Sun Young KimDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Jin Ho ParkDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Chang Ho KangDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Yong Hun ChiDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Il Pyung AhnNational Academy of Agricultural Science, RDA, Suwon 441-856, Korea.
Dae Jin YunDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Kyun Oh LeeDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea.
Young-Myeong KimDepartment of Molecular and Cellular Biochemistry, College of Medicine, Kangwon National University, Chunchon, Korea.
Min Gab KimNational Academy of Agricultural Science, RDA, Suwon 441-856, Korea; College of Pharmacy, Gyeongsang National University, Jinju 660-751, Korea. Electronic address: mgk1284@gnu.ac.kr.
Sang Yeol LeeDivision of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, 660-701, Korea. Electronic address: sylee@gnu.ac.kr.
Gyeongsang National University · KRNational Academy of Agricultural Science · KRKangwon National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel Arabidopsis thaliana inhibitor of apoptosis was identified by sequence homology to other known inhibitor of apoptosis (IAP) proteins. Arabidopsis IAP-like protein (AtILP) contained a C-terminal RING finger domain but lacked a baculovirus IAP repeat (BIR) domain, which is essential for anti-apoptotic activity in other IAP family members. The expression of AtILP in HeLa cells conferred resistance against tumor necrosis factor (TNF)-α/ActD-induced apoptosis through the inactivation of caspase activity. In contrast to the C-terminal RING domain of AtILP, which did not inhibit the activity of caspase-3, the N-terminal region, despite displaying no homology to known BIR domains, potently inhibited the activity of caspase-3 in vitro and blocked TNF-α/ActD-induced apoptosis. The anti-apoptotic activity of the AtILP N-terminal domain observed in plants was reproduced in an animal system. Transgenic Arabidopsis lines overexpressing AtILP exhibited anti-apoptotic activity when challenged with the fungal toxin fumonisin B1, an agent that induces apoptosis-like cell death in plants. In AtIPL transgenic plants, suppression of cell death was accompanied by inhibition of caspase activation and DNA fragmentation. Overexpression of AtILP also attenuated effector protein-induced cell death and increased the growth of an avirulent bacterial pathogen. The current results demonstrated the existence of a novel plant IAP-like protein that prevents caspase activation in Arabidopsis and showed that a plant anti-apoptosis gene functions similarly in plant and animal systems.

Indexed as

Amino Acid SequenceAnimalsApoptosisArabidopsisBaculoviridaeBase SequenceCaspase 3Cell DeathCell SurvivalDNAFumonisinsHeLa CellsHumansInhibitor of Apoptosis ProteinsMolecular Sequence DataPlants, Genetically ModifiedCaspase 3DNAfumonisin B1FumonisinsInhibitor of Apoptosis Proteins

Identifiers

PMID21926169
PMCPMC3234929
OpenAlexW2039804404

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.