Evidence map›Paper›PMID 21925648›Full record

ArticleBrain research2011

Quantitative estimates of the cytoplasmic, PSD, and NMDAR-bound pools of CaMKII in dendritic spines.

Bihua Feng, Sridhar Raghavachari, John Lisman

Abstract read
In one paragraph

Article in Brain research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Synaptic memory and CaMKII.Physiological reviews · 2023
    Review
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  15. Multiple spatial and kinetic subpopulations of CaMKII in spines and dendrites as resolved by single-molecule tracking PALM.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Bihua FengBiology Department and Volen Center for Complex Systems, Brandeis University, Waltham, MA 02454-9110, USA.
Sridhar Raghavachari
John Lisman
Brandeis University · US

Funding

MECHANISMS OF LONG-TERM POTENTIATIONR01NS027337 · NINDS · BRANDEIS UNIVERSITY · PI LISMAN, JOHN E · 1989 to 2010
$3.7M
CRCNS: Quantitative description of initial biochemical steps in LTPR01DA027807 · NIDA · BRANDEIS UNIVERSITY · PI LISMAN, JOHN E · 2009 to 2013
$1.6M
NIDA NIH HHS R01 DA027807NINDS NIH HHS R01 NS027337NINDS NIH HHS R01 NS27337
6 · The paper itself

Abstract

CaMKII plays a critical role in long-term potentiation (LTP). The kinase is a major component of the postsynaptic density (PSD); however, it is also contained in the spine cytoplasm. CaMKII can now be monitored optically in living neurons, and it is therefore important to understand the contribution of the PSD and cytoplasmic pools to optical signals. Here, we estimate the size of these pools under basal conditions. From EM immunolabeling data, we calculate that the PSD/cytoplasmic ratio is ~5%. A second independent estimate is derived from measurements indicating that the average mushroom spine PSD contains 90 to 240 holoenzymes. A cytoplasmic concentration of 16 μM (~2590 holoenzymes) in the spine can be estimated from the total measured CaMKII content of hippocampal tissue, the relative volume of different compartments, and the spine-dendrite ratio of CaMKII (2:1). These numbers yield a second estimate (6%) of the PSD/spine ratio in good agreement with the first. The CaMKII bound to the NMDAR is important because preventing the formation of this complex blocks LTP induction. We estimate that the percentage of spine CaMKII held active by binding to the NMDAR is ~0.2%. Implications of the high spine concentration of CaMKII (> 100 μM alpha subunits) and the small fraction within the PSD are discussed. Of particular note, the finding that the CaMKII signal in spines shows only transient activation (open state) after LTP induction is subject to the qualification that it does not reflect the small but important pool bound to the NMDAR.

Indexed as

AnimalsCalcium-Calmodulin-Dependent Protein Kinase Type 2CytoplasmDendritic SpinesHippocampusMicePost-Synaptic DensityPrimary Cell CultureRatsReceptors, N-Methyl-D-AspartateCalcium-Calmodulin-Dependent Protein Kinase Type 2Receptors, N-Methyl-D-Aspartate

Identifiers

PMID21925648
PMCPMC3196057
OpenAlexW2006683312

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.