Evidence map›Paper›PMID 21925606›Full record

ArticleJournal of structural biology2011

Rhodopsin-transducin heteropentamer: three-dimensional structure and biochemical characterization.

Beata Jastrzebska, Philippe Ringler, David T Lodowski, Vera Moiseenkova-Bell, Marcin Golczak, Shirley A Müller, Krzysztof Palczewski, Andreas Engel

Abstract read
In one paragraph

Article in Journal of structural biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
  2. Article
  3. Supramolecular organization of rhodopsin in rod photoreceptor cell membranes.Pflugers Archiv : European journal of physiology · 2021
    Review
  4. Exploring the Activation Process of the β2AR-GJournal of the American Chemical Society · 2021
    Article
  5. Stereospecific modulation of dimeric rhodopsin.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  6. Exploring the free-energy landscape of GPCR activation.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  7. BetaBiochimica et biophysica acta. Biomembranes · 2017
    Article
  8. Shining a light on GPCR complexes.The Journal of biological chemistry · 2017
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. The G protein-coupled receptor rhodopsin: a historical perspective.Methods in molecular biology (Clifton, N.J.) · 2015
    Article
  16. Chemistry and biology of the initial steps in vision: the Friedenwald lecture.Investigative ophthalmology & visual science · 2014
    Article
  17. Article
  18. Review
  19. Structural bases for the interaction and stabilization of the human amino acid transporter LAT2 with its ancillary protein 4F2hc.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Beata JastrzebskaDepartment of Pharmacology, School of Medicine, Case Western Reserve University, Cleveland, OH 44106-4965, USA. bxj27@case.edu
Philippe Ringler
David T Lodowski
Vera Moiseenkova-Bell
Marcin Golczak
Shirley A Müller
Krzysztof Palczewski
Andreas Engel
Case Western Reserve University · USUniversity of Basel · CH

Funding

TISSUE CULTURE AND HYBRIDOMA MODULEP30EY011373 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI Irina A Pikuleva · 1997 to 2026
$17.7M
REGULATION OF RHODOPSIN KINASE AND GUANYLATE CYCLASER01EY008061 · NEI · UNIVERSITY OF WASHINGTON · PI PALCZEWSKI, KRZYSZTOF · 1994 to 2014
$9.5M
UNIVERSITY OF WASHINGTONU54GM094598 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI STOKES, DAVID L. · 2010 to 2014
$8.3M
Structural dissection of the visual signaling network in cone cellsR01EY019478 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI ENGEL, ANDREAS HERMANN, PALCZEWSKI, KRZYSZTOF · 2009 to 2013
$1.9M
STRUCTURAL STUDIES OF G PROTEIN-COUPLED RECEPTORSR01GM079191 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI PALCZEWSKI, KRZYSZTOF · 2007 to 2010
$845k
Structural Studies in Rhodopsin and G Protein ActivationR00EY019718 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI LODOWSKI, DAVID THOMAS · 2012 to 2014
$629k
Structural Studies in Rhodopsin and G Protein ActivationK99EY019718 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI LODOWSKI, DAVID THOMAS · 2010 to 2011
$180k
RHODOPSIN KINASE: REGULATION, FUNCTION AND STRUCTURER29EY008061 · NEI · UNIVERSITY OF WASHINGTON · PI PALCZEWSKI, KRZYSZTOF NMI · 1989 to 1993
–
NEI NIH HHS EY008061NEI NIH HHS EY019718NEI NIH HHS K99 EY019718NEI NIH HHS P30 EY011373NEI NIH HHS P30EY11373NEI NIH HHS R00 EY019718NEI NIH HHS R01 EY008061NEI NIH HHS R01 EY019478NIGMS NIH HHS GM079191NIGMS NIH HHS R01 GM079191NIGMS NIH HHS U54 GM094598
6 · The paper itself

Abstract

The process of vision is initiated when the G protein-coupled receptor, rhodopsin (Rho), absorbs a photon and transitions to its activated Rho(∗) form. Rho(∗) binds the heterotrimeric G protein, transducin (G(t)) inducing GDP to GTP exchange and G(t) dissociation. Using nucleotide depletion and affinity chromatography, we trapped and purified the resulting nucleotide-free Rho(∗)·G(t) complex. Quantitative SDS-PAGE suggested a 2:1 molar ratio of Rho(∗) to G(t) in the complex and its mass determined by scanning transmission electron microscopy was 221±12kDa. A 21.6Å structure was calculated from projections of negatively stained Rho(∗)·G(t) complexes. The molecular envelope thus determined accommodated two Rho molecules together with one G(t) heterotrimer, corroborating the heteropentameric structure of the Rho(∗)·G(t) complex.

Indexed as

Electrophoresis, Polyacrylamide GelGuanosine DiphosphateGuanosine TriphosphateLightMicroscopy, Electron, TransmissionModels, MolecularMultiprotein ComplexesProtein BindingProtein MultimerizationRhodopsinTransducinGuanosine DiphosphateGuanosine TriphosphateMultiprotein ComplexesRhodopsinTransducin

Identifiers

PMID21925606
PMCPMC3210324
OpenAlexW2126839526

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.