Evidence map›Paper›PMID 21925375›Full record

ReviewMolecular cell2011

Mechanisms and consequences of alternative polyadenylation.

Dafne Campigli Di Giammartino, Kensei Nishida, James L Manley

Abstract readReview
In one paragraph

Review in Molecular cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 475 papers.

0numbers the graph read from it
0cells of the map it votes in
475citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

475 citing papers in PubMed.

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  10. TDP-43: [GU]-ardian of the transcriptome.Molecular neurodegeneration · 2026
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415 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Dafne Campigli Di GiammartinoDepartment of Biological Sciences, Columbia University, New York, NY 10027, USA.
Kensei Nishida
James L Manley

Funding

MRNA SYTHESIS IN ANIMAL CELLS--3END FORMATIONR01GM028983 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI MANLEY, JAMES L. · 1985 to 2014
$6.4M
NIGMS NIH HHS R01 GM028983NIGMS NIH HHS R01 GM28983
6 · The paper itself

Abstract

Alternative polyadenylation (APA) is emerging as a widespread mechanism used to control gene expression. Like alternative splicing, usage of alternative poly(A) sites allows a single gene to encode multiple mRNA transcripts. In some cases, this changes the mRNA coding potential; in other cases, the code remains unchanged but the 3' UTR length is altered, influencing the fate of mRNAs in several ways, for example, by altering the availability of RNA binding protein sites and microRNA binding sites. The mechanisms governing both global and gene-specific APA are only starting to be deciphered. Here we review what is known about these mechanisms and the functional consequences of alternative polyadenylation.

Indexed as

Gene Expression RegulationPolyadenylation3' Untranslated RegionsAnimalsBinding SitesChromatinEpigenesis, GeneticHumansMiceMicroRNAsModels, GeneticRNA, Messenger3' Untranslated RegionsChromatinMicroRNAsRNA, Messenger

Identifiers

PMID21925375
PMCPMC3194005

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.