Evidence map›Paper›PMID 21925124›Full record

ArticleGastroenterology2011

N-methyl D-aspartate channels link ammonia and epithelial cell death mechanisms in Helicobacter pylori Infection.

Ji Hye Seo, James G Fox, Richard M Peek, Susan J Hagen

Open access · bronzeAbstract read
In one paragraph

Article in Gastroenterology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  3. Article
  4. Review
  5. Article
  6. Ammonia generation by tryptophan synthase drives a key genetic difference between genital and ocularProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Ji Hye SeoDepartment of Surgery, Beth Israel Deaconess Medical Center, Boston, Massachusetts 02215, USA.
James G Fox
Richard M Peek
Susan J Hagen
Beth Israel Deaconess Medical Center · USMassachusetts Institute of Technology · USVanderbilt University Medical Center · US

Funding

TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YAFFE, MICHAEL B · 1985 to 2020
$25.6M
H.Pylori Relationship to Digestive Diseases and CancerR01CA077955 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2003 to 2026
$9.7M
Helicobacter Pylori and Gastrointestinal BiologyR01DK058587 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PEEK, RICHARD M. · 2001 to 2024
$7.8M
IN VIVO PATHOGENESIS OF HELICOBACTER PYLORIR01AI037750 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FOX, JAMES G · 1996 to 2009
$3.5M
GI MUCOSAL BARRIER IN HEALTH AND SURGICAL DISEASER01DK015681 · NIDDK · BETH ISRAEL DEACONESS MEDICAL CENTER · PI HAGEN, SUSAN J · 1986 to 2008
$3.0M
CONFOCAL MICROSCOPE: SURGICAL DISEASES, WOUND HEALINGS10RR017927 · NCRR · BETH ISRAEL DEACONESS MEDICAL CENTER · PI HAGEN, SUSAN J · 2006 to 2006
$427k
H FELIS EFFECT ON A GASTRIC CANCER MODELR01CA067463 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI WANG, TIMOTHY CRAGIN · 1995 to 1998
–
NCI NIH HHS R01CA067463NCI NIH HHS R01 CA077955NCI NIH HHS R01CA77955NCRR NIH HHS S10 RR017927NCRR NIH HHS S10RR017927NIAID NIH HHS R01AI/RR037750NIDDK NIH HHS P30DK037854NIDDK NIH HHS R01 DK015681NIDDK NIH HHS R01DK015681NIDDK NIH HHS R01 DK058587NIDDK NIH HHS R01DK058587NIEHS NIH HHS P30 ES002109PHS HHS P01116037
6 · The paper itself

Abstract

BACKGROUND &

aimsHelicobacter pylori infection is a risk factor for gastric cancer. Ammonia/ammonium (A/A) is a cytotoxin generated by H pylori that kills gastric epithelial cells. We investigated whether A/A cytotoxicity occurs by activating N-methyl d-aspartate (NMDA) channels, which results in Ca(2+) permeation and epithelial cell death.

methodsGastric epithelial cells were cultured to confluence and then incubated with A/A and NMDA channel or cell signaling antagonists. Cells were incubated with wild-type H pylori or mutant strains that do not produce A/A. Changes in intracellular Ca(2+) were examined in living cells by confocal microscopy. Biochemical and histochemical techniques were used to examine the relationship between A/A-induced cell death and intracellular levels of Ca(2+).

resultsA/A increased Ca(2+) permeation in gastric epithelial cells; the increase was blocked by NMDA receptor and cell signaling antagonists. Wild-type, but not mutant H pylori, also caused extensive Ca(2+) permeation of gastric epithelial cells, which was blocked when NMDA-receptor expression was repressed. Ca(2+) that entered cells was initially cytoplasmic and activated proteases. Later, the Ca(2+) was sequestered to cytoplasmic vacuoles that are dilatations of the endoplasmic reticulum. Inositol-3-phosphate-dependent release of Ca(2+) from the endoplasmic reticulum and protease activity damaged mitochondria, reduced levels of adenosine triphosphate, and transcriptionally up-regulated cell death effectors. Expression of the NMDA receptor was altered in stomachs of mice infected with H pylori.

conclusionsA/A affects gastric epithelial cell viability by allowing excessive Ca(2+) permeation through NMDA channels. NMDA channels might thereby regulate cell survival and death pathways during development of gastric cancers associated with H pylori infection.

Indexed as

AmmoniaAnimalsBlotting, WesternCalciumCell DeathCells, CulturedCytotoxinsEpithelial CellsGastric MucosaHelicobacter InfectionsHelicobacter pyloriImmunohistochemistryMiceMicroscopy, ConfocalN-MethylaspartateRatsAmmoniaCalciumCytotoxinsN-MethylaspartateReceptors, N-Methyl-D-Aspartate

Identifiers

PMID21925124
PMCPMC3658443
OpenAlexW2095397649

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.