Evidence map›Paper›PMID 21922402›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2011

Intron-specific neuropeptide probes.

Harold Gainer, Todd A Ponzio, Chunmei Yue, Makoto Kawasaki

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Harold GainerLaboratory of Neurochemistry, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA. gainerh@ninds.nih.gov
Todd A Ponzio
Chunmei Yue
Makoto Kawasaki
National Institute of Neurological Disorders and Stroke · USChinese Academy of Sciences · CNUniversity of Occupational and Environmental Health Japan · JP

Funding

Regulation of Oxytocin and Vasopressin Gene Expression in the hypothalamus.ZIANS002723 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI GAINER, HAROLD · 2009 to 2012
$4.1M
Intramural NIH HHS Z99 NS999999
6 · The paper itself

Abstract

Measurements of changes in pre-mRNA levels by intron-specific probes are generally accepted as more closely reflecting changes in gene transcription rates than are measurements of mRNA levels by exonic probes. This is, in part, because the pre-mRNAs, which include the primary transcript and various splicing intermediates located in the nucleus (also referred to as heteronuclear RNAs, or hnRNAs), are processed rapidly (with half-lives <60 min) as compared to neuropeptide mRNAs, which are then transferred to the cytoplasm and which have much longer half-lives (often over days). In this chapter, we describe the use of exon-and intron-specific probes to evaluate oxytocin (OT) and vasopressin (VP) neuropeptide gene expression by analyses of their mRNAs and hnRNAs by quantitative in situ hybridization (qISH) and also by using specific PCR primers in quantitative, real-time PCR (qPCR) procedures.

Indexed as

AnimalsHumansIn Situ HybridizationIntronsNeuropeptidesOxytocinReal-Time Polymerase Chain ReactionRNA, Heterogeneous NuclearRNA PrecursorsVasopressinsNeuropeptidesOxytocinRNA, Heterogeneous NuclearRNA PrecursorsVasopressins

Identifiers

PMID21922402
PMCPMC5079187
OpenAlexW2464045848

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.