Evidence map›Paper›PMID 21921928›Full record

ReviewNature reviews. Genetics2011

Assessing and managing risk when sharing aggregate genetic variant data.

David W Craig, Robert M Goor, Zhenyuan Wang, Justin Paschall, Jim Ostell, Michael Feolo, Stephen T Sherry, Teri A Manolio

Erratum issuedAbstract readReview
In one paragraph

Review in Nature reviews. Genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 34 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Registered access: authorizing data access.European journal of human genetics : EJHG · 2018
    Article
  13. Review
  14. Detecting the Presence of an Individual in Phenotypic Summary Data.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2018
    Article
  15. Review
  16. Article
  17. Identification of individuals by trait prediction using whole-genome sequencing data.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  18. Article
  19. Article
  20. Privacy in the Genomic Era.ACM computing surveys · 2015
    Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors.

David W CraigTranslational Genomics Research Institute (TGen), Phoenix, Arizona 85004, USA. dcraig@tgen.org
Robert M Goor
Zhenyuan Wang
Justin Paschall
Jim Ostell
Michael Feolo
Stephen T Sherry
Teri A Manolio

Funding

Design and Analysis of Multi-Staged Association Studies Using Pooled Genomic DNAU01HL086528 · NHLBI · TRANSLATIONAL GENOMICS RESEARCH INST · PI CRAIG, DAVID W · 2006 to 2008
$1.1M
Intramural NIH HHS Z99 CL999999Intramural NIH HHS Z99 HL999999Intramural NIH HHS Z99 LM999999Intramural NIH HHS Z99 MH999999NHLBI NIH HHS U01 HL086528
6 · The paper itself

Abstract

Access to genetic data across studies is an important aspect of identifying new genetic associations through genome-wide association studies (GWASs). Meta-analysis across multiple GWASs with combined cohort sizes of tens of thousands of individuals often uncovers many more genome-wide associated loci than the original individual studies; this emphasizes the importance of tools and mechanisms for data sharing. However, even sharing summary-level data, such as allele frequencies, inherently carries some degree of privacy risk to study participants. Here we discuss mechanisms and resources for sharing data from GWASs, particularly focusing on approaches for assessing and quantifying the privacy risks to participants that result from the sharing of summary-level data.

Indexed as

Data CollectionGenetic VariationGenome-Wide Association StudyCohort StudiesConfidentialityDatabases, GeneticHumansInformation DisseminationMeta-Analysis as TopicPolymorphism, Single NucleotideRisk Assessment

Identifiers

PMID21921928
PMCPMC3349221

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.