Evidence map›Paper›PMID 21920902›Full record

ArticleGenome biology and evolution2011

The distribution of mobile genetic elements (MGEs) in MRSA CC398 is associated with both host and country.

Alex J McCarthy, Adam A Witney, Katherine A Gould, Arshnee Moodley, Luca Guardabassi, Andreas Voss, Olivier Denis, Els M Broens, Jason Hinds, Jodi A Lindsay

Open access · goldAbstract readComparative Study
In one paragraph

Article in Genome biology and evolution, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
  2. Review
  3. The Role of Prophage ϕSa3 in the Adaption ofAntibiotics (Basel, Switzerland) · 2024
    Article
  4. Article
  5. TheGenes · 2021
    Review
  6. Article
  7. Review
  8. Genomic Insights into Methicillin-Resistant Staphylococcus aureusApplied and environmental microbiology · 2021
    Article
  9. Genomic Analysis ofFrontiers in microbiology · 2021
    Article
  10. Livestock-Associated and Non-Livestock-AssociatedInfection and drug resistance · 2021
    Article
  11. Article
  12. Acquisition Risk Factors of the SCCAntibiotics (Basel, Switzerland) · 2020
    Article
  13. Article
  14. Staphylococci: Evolving Genomes.Microbiology spectrum · 2019
    Review
  15. Microbiology spectrum · 2019
    Article
  16. CC398 Staphylococcus aureus subpopulations in Belgian patients.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2018
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Alex J McCarthyCentre for Infection, Department of Clinical Sciences, St George's University of London, United Kingdom.
Adam A Witney
Katherine A Gould
Arshnee Moodley
Luca Guardabassi
Andreas Voss
Olivier Denis
Els M Broens
Jason Hinds
Jodi A Lindsay
St George's, University of London · GBUniversity of Copenhagen · DKCanisius-Wilhelmina Ziekenhuis · NLUniversité Libre de Bruxelles · BEWageningen University & Research · NL

Funding

Wellcome Trust 086547
6 · The paper itself

Abstract

Methicillin-resistant Staphylococcus aureus clonal complex (CC) 398 has emerged from pigs to cause human infections in Europe and North America. We used a new 62-strain S. aureus microarray (SAM-62) to compare genomes of isolates from three geographical areas (Belgium, Denmark, and Netherlands) to understand how CC398 colonizes different mammalian hosts. The core genomes of 44 pig isolates and 32 isolates from humans did not vary. However, mobile genetic element (MGE) distribution was variable including SCCmec. ϕ3 bacteriophage and human specificity genes (chp, sak, scn) were found in invasive human but not pig isolates. SaPI5 and putative ruminant specificity gene variants (vwb and scn) were common but not pig specific. Virulence and resistance gene carriage was host associated but country specific. We conclude MGE exchange is frequent in CC398 and greatest among populations in close contact. This feature may help determine epidemiological associations among isolates of the same lineage.

Indexed as

Interspersed Repetitive SequencesAnimalsBelgiumDenmarkGenetic VariationGenome, BacterialHost-Pathogen InteractionsHumansMethicillin-Resistant Staphylococcus aureusNetherlandsStaphylococcus aureusSwineVirulence FactorsVirulence Factors

Identifiers

PMID21920902
PMCPMC3205603
OpenAlexW2120762131

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.