Evidence map›Paper›PMID 21918817›Full record

ArticleMolecular genetics and genomics : MGG2011

Relationship between transmission ratio distortion and genetic divergence in intraspecific rice crosses.

Kazuki Matsubara, Kaworu Ebana, Tatsumi Mizubayashi, Sachie Itoh, Tsuyu Ando, Yasunori Nonoue, Nozomi Ono, Taeko Shibaya, Eri Ogiso, Kiyosumi Hori and 2 more

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Article in Molecular genetics and genomics : MGG, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

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12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Linkage Map ofG3 (Bethesda, Md.) · 2017
    Article
  6. Article
  7. Article
  8. Article
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  12. OsGA20ox1, a candidate gene for a major QTL controlling seedling vigor in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012
    Article
4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Kazuki MatsubaraNational Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan.
Kaworu Ebana
Tatsumi Mizubayashi
Sachie Itoh
Tsuyu Ando
Yasunori Nonoue
Nozomi Ono
Taeko Shibaya
Eri Ogiso
Kiyosumi Hori
Shuichi Fukuoka
Masahiro Yano

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The strength of reproductive isolation often correlates positively with parental divergence in both animals and plants. Here, we assess the relationship between transmission ratio distortion (TRD) of marker loci and parental divergence in intraspecific rice (Oryza sativa L.) crosses. We produced 10 diverse F(2) populations by crossing a temperate japonica reference accession with each of 10 donor accessions belonging to subpopulations different from the reference accession, and then genotyped the F(2) populations using molecular markers distributed across the entire genome. Significant TRDs (α = 0.05) were detected in 9 of the 10 F(2) populations. TRD regions on chromosomes 3 and 6 were common to several populations; in contrast, other TRD regions were unique to a single population, indicating the diversification of genomic location of TRDs among the populations. The level of TRD (estimated from the overall number and magnitude of TRDs) was significantly correlated with the genetic distance between the donor accessions and the reference accession. Our results suggest that in intraspecific rice crosses, parental divergence may result in diversification of the TRD pattern, followed by an increase in the level of TRD.

Indexed as

Crosses, GeneticGenetic DriftChromosomes, PlantGenome, PlantOryzaSpecies Specificity

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.