ArticleWeb semantics (Online)2011
NCBO Resource Index: Ontology-Based Search and Mining of Biomedical Resources.
Article in Web semantics (Online), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
19 citing papers in PubMed.
- "Do It by Myself" or Autonomy, Participation, and Assistive Devices and Technology Needs of Children and Youth With Disabilities: Text Mining Analysis of a National Survey in France.JMIR medical informatics · 2026Article
- PheNominal: an EHR-integrated web application for structured deep phenotyping at the point of care.BMC medical informatics and decision making · 2022Article
- OMeta: an ontology-based, data-driven metadata tracking system.BMC bioinformatics · 2019Article
- Multidisciplinary Smartphone-Based Interventions to Empower Patients With Acute Coronary Syndromes: Qualitative Study on Health Care Providers' Perspectives.JMIR cardio · 2018Article
- NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation.Journal of biomedical semantics · 2017Article
- Ontobee: A linked ontology data server to support ontology term dereferencing, linkage, query and integration.Nucleic acids research · 2017Article
- The Pre-Eclampsia Ontology: A Disease Ontology Representing the Domain Knowledge Specific to Pre-Eclampsia.PloS one · 2016Article
- Data integration in biological research: an overview.Journal of biological research (Thessalonike, Greece) · 2015Review
- KaBOB: ontology-based semantic integration of biomedical databases.BMC bioinformatics · 2015Article
- Automated mapping of clinical terms into SNOMED-CT. An application to codify procedures in pathology.Journal of medical systems · 2014Article
- Comparative analysis of knowledge representation and reasoning requirements across a range of life sciences textbooks.Journal of biomedical semantics · 2014Article
- Ontology-Based Querying with Bio2RDF's Linked Open Data.Journal of biomedical semantics · 2013Article
- NCBO Technology: Powering semantically aware applications.Journal of biomedical semantics · 2013Article
- The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary.Database : the journal of biological databases and curation · 2013Article
- Standardization of Questions in Rare Disease Registries: The PRISM Library Project.Interactive journal of medical research · 2012Article
- Querying phenotype-genotype relationships on patient datasets using semantic web technology: the example of Cerebrotendinous xanthomatosis.BMC medical informatics and decision making · 2012Article
- Using ontology-based annotation to profile disease research.Journal of the American Medical Informatics Association : JAMIA · 2012Article
- Semantically enabling pharmacogenomic data for the realization of personalized medicine.Pharmacogenomics · 2012Review
- Enabling enrichment analysis with the Human Disease Ontology.Journal of biomedical informatics · 2011Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors.
Funding
Abstract
The volume of publicly available data in biomedicine is constantly increasing. However, these data are stored in different formats and on different platforms. Integrating these data will enable us to facilitate the pace of medical discoveries by providing scientists with a unified view of this diverse information. Under the auspices of the National Center for Biomedical Ontology (NCBO), we have developed the Resource Index-a growing, large-scale ontology-based index of more than twenty heterogeneous biomedical resources. The resources come from a variety of repositories maintained by organizations from around the world. We use a set of over 200 publicly available ontologies contributed by researchers in various domains to annotate the elements in these resources. We use the semantics that the ontologies encode, such as different properties of classes, the class hierarchies, and the mappings between ontologies, in order to improve the search experience for the Resource Index user. Our user interface enables scientists to search the multiple resources quickly and efficiently using domain terms, without even being aware that there is semantics "under the hood."
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.