Evidence map›Paper›PMID 21917950›Full record

ArticleJournal of virology2011

TRIM5α does not affect simian immunodeficiency virus SIV(mac251) replication in vaccinated or unvaccinated Indian rhesus macaques following intrarectal challenge exposure.

Claudio Fenizia, Brandon F Keele, David Nichols, Stefano Cornara, Nicolò Binello, Monica Vaccari, Poonam Pegu, Marjorie Robert-Guroff, Zhong-Min Ma, Christopher J Miller and 3 more

Abstract readComparative Study
In one paragraph

Article in Journal of virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Impact of TRIM5α in vivo.AIDS (London, England) · 2015
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Nonhuman primate models for HIV/AIDS vaccine development.Current protocols in immunology · 2013
    Review
  16. Review
  17. Review
  18. Using nonhuman primates to model HIV transmission.Current opinion in HIV and AIDS · 2013
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Claudio FeniziaAnimal Models and Retroviral Vaccines Section, Vaccine Branch, National Institutes of Health, Bethesda, Maryland 20892, USA.
Brandon F Keele
David Nichols
Stefano Cornara
Nicolò Binello
Monica Vaccari
Poonam Pegu
Marjorie Robert-Guroff
Zhong-Min Ma
Christopher J Miller
David Venzon
Vanessa Hirsch
Genoveffa Franchini
National Institutes of Health · USUniversity of California, Davis · USScience Applications International Corporation (United States) · US

Funding

Preventive Vaccines for HIVZIABC011126 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FRANCHINI, GENOVEFFA · 2009 to 2025
$55.3M
Pathogenesis Studies Of Simian Immunodeficiency Virus Infection Of MonkeysZIAAI000370 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI HIRSCH, VANESSA M. · 2009 to 2022
$16.2M
Office of Collaborative BiostatisticsZIDSC007202 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI CHOO-WOSOBA, HYOYOUNG · 2009 to 2025
$14.5M
6 · The paper itself

Abstract

TRIM5α is a natural resistance factor that binds retroviral capsid proteins and restricts virus replication. The B30.2/SPRY domain of TRIM5α is polymorphic in rhesus macaques, and some alleles are associated with reduced simian immunodeficiency virus (SIV) SIV(mac251) and SIV(smE543) replication in vivo. We determined the distribution of TRIM5α alleles by PCR and sequence analysis of the B30.2/SPRY domain in a cohort of 82 macaques. Thirty-nine of these macaques were mock vaccinated, 43 were vaccinated with either DNA-SIV/ALVAC-SIV/gp120, ALVAC-SIV/gp120, or gp120 alone, and all were exposed intrarectally to SIV(mac251) at one of three doses. We assessed whether the TRIM5α genotype of the macaques affected the replication of challenge virus by studying the number of SIV variants transmitted, the number of exposures required, the SIV(mac251) viral level in plasma and tissue, and the CD4(+) T-cell counts. Our results demonstrated that TRIM5α alleles, previously identified as restrictive for SIV(mac251) replication in vivo following intravenous exposure, did not affect SIV(mac251) replication following mucosal exposure, regardless of prior vaccination, challenge dose, or the presence of the protective major histocompatibility complex alleles (MamuA01(+), MamuB08(+), or MamuB017(+)). The TRIM5α genotype had no apparent effect on the number of transmitted variants or the number of challenge exposures necessary to infect the animals. DNA sequencing of the SIV(mac251) Gag gene of the two stocks used in our study revealed SIV(mac239)-like sequences that are predicted to be resistant to TRIM5α restriction. Thus, the TRIM5α genotype does not confound results of mucosal infection of rhesus macaques with SIV(mac251).

Indexed as

Virus ReplicationAdministration, RectalAnimalsCD4-Positive T-LymphocytesGenome, ViralImmunity, MucosalMacaca mulattaPolymorphism, GeneticProteinsRNA, ViralSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusT-LymphocytesUbiquitin-Protein LigasesVaccinationViral VaccinesProteinsRNA, ViralTRIM5(alpha) protein, rhesus monkeyUbiquitin-Protein LigasesViral Vaccines

Identifiers

PMID21917950
PMCPMC3209340
OpenAlexW2166706226

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.