Evidence map›Paper›PMID 21916458›Full record

ArticleJournal of the American Chemical Society2011

Lysine-specific molecular tweezers are broad-spectrum inhibitors of assembly and toxicity of amyloid proteins.

Sharmistha Sinha, Dahabada H J Lopes, Zhenming Du, Eric S Pang, Akila Shanmugam, Aleksey Lomakin, Peter Talbiersky, Annette Tennstaedt, Kirsten McDaniel, Reena Bakshi and 8 more

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 127 papers.

0numbers the graph read from it
0cells of the map it votes in
127citing papers in PubMed
10.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

127 citing papers in PubMed, 293 citations in OpenAlex.

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  9. Light-Triggered Disassembly of Peptide Nanostructures.Chembiochem : a European journal of chemical biology · 2025
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67 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 2 countries.

Sharmistha SinhaDepartment of Neurology, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, California 90095, USA.
Dahabada H J Lopes
Zhenming Du
Eric S Pang
Akila Shanmugam
Aleksey Lomakin
Peter Talbiersky
Annette Tennstaedt
Kirsten McDaniel
Reena Bakshi
Pei-Yi Kuo
Michael Ehrmann
George B Benedek
Joseph A Loo
Frank-Gerrit Klärner
Thomas Schrader
Chunyu Wang
Gal Bitan
University of California, Los Angeles · USUniversity of Duisburg-Essen · DEMassachusetts Institute of Technology · USRensselaer Polytechnic Institute · US

Funding

PROTEIN CHEMISTRY COREP01AG027818 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TEPLOW, DAVID B. · 2006 to 2010
$7.6M
UV Laser for Photodissociation-Mass Spectrometry of Proteins and Protein ComplexesR01GM103479 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOO, JOSEPH A · 2012 to 2021
$3.2M
Mass Spectrometry of Protein AssembliesR01RR020004 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOO, JOSEPH A · 2004 to 2011
$2.7M
High Resolution Hybrid FT-ICR Mass SpectrometerS10RR023045 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOO, JOSEPH A · 2006 to 2006
$1.2M
NCRR NIH HHS R01 RR020004NCRR NIH HHS RR20004NCRR NIH HHS S10 RR023045NIA NIH HHS AG027818NIA NIH HHS P01 AG027818NIGMS NIH HHS R01 GM103479
6 · The paper itself

Abstract

Amyloidoses are diseases characterized by abnormal protein folding and self-assembly, for which no cure is available. Inhibition or modulation of abnormal protein self-assembly, therefore, is an attractive strategy for prevention and treatment of amyloidoses. We examined Lys-specific molecular tweezers and discovered a lead compound termed CLR01, which is capable of inhibiting the aggregation and toxicity of multiple amyloidogenic proteins by binding to Lys residues and disrupting hydrophobic and electrostatic interactions important for nucleation, oligomerization, and fibril elongation. Importantly, CLR01 shows no toxicity at concentrations substantially higher than those needed for inhibition. We used amyloid β-protein (Aβ) to further explore the binding site(s) of CLR01 and the impact of its binding on the assembly process. Mass spectrometry and solution-state NMR demonstrated binding of CLR01 to the Lys residues in Aβ at the earliest stages of assembly. The resulting complexes were indistinguishable in size and morphology from Aβ oligomers but were nontoxic and were not recognized by the oligomer-specific antibody A11. Thus, CLR01 binds already at the monomer stage and modulates the assembly reaction into formation of nontoxic structures. The data suggest that molecular tweezers are unique, process-specific inhibitors of aberrant protein aggregation and toxicity, which hold promise for developing disease-modifying therapy for amyloidoses.

Indexed as

Amyloid beta-PeptidesAmyloidosisAnimalsBinding SitesBridged-Ring CompoundsLysineOrganophosphatesPC12 CellsProtein BindingProteinsProtein Structure, SecondaryRatsAmyloid beta-PeptidesBridged-Ring CompoundsCLR01 compoundLysineOrganophosphatesProteins

Identifiers

PMID21916458
PMCPMC3210512
OpenAlexW2002900801

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.