ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2012
Genome-wide association mapping of agronomic and morphologic traits in highly structured populations of barley cultivars.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 58 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
58 citing papers in PubMed.
- Genome-wide association study of pre-indicative agronomic traits affecting malt quality in Ethiopian barley (Hordeum vulgare L.) germplasm.BMC genomics · 2026Article
- Association mapping of wheat distinctness, uniformity, and stability traits identifies evidence ofFrontiers in plant science · 2026Article
- The Barley Glycosyltransferase GenePlants (Basel, Switzerland) · 2025Article
- GWAS identifies novel loci linked to seedling growth traits in highly diverse barley population under drought stress.Scientific reports · 2025Article
- Multi-population GWAS detects robust marker associations in a newly established six-rowed winter barley breeding program.Heredity · 2025Article
- Genome-Wide Association for Morphological and Agronomic Traits inPlants (Basel, Switzerland) · 2024Article
- Effect of Chromosomal Localization of NGS-Based Markers on Their Applicability for Analyzing Genetic Variation and Population Structure of Hexaploid Triticale.International journal of molecular sciences · 2024Article
- Genome-wide association and targeted transcriptomic analyses reveal loci and candidate genes regulating preharvest sprouting in barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Article
- Genome-wide association study for resistance in bread wheat (Triticum aestivum L.) to stripe rust (Puccinia striiformis f. sp. tritici) races in Argentina.BMC plant biology · 2022Article
- Identification of a Negative Regulator for Salt Tolerance at Seedling Stage via a Genome-Wide Association Study of Thai Rice Populations.International journal of molecular sciences · 2022Article
- Genetic diversity and population structure analysis for morphological traits in upland cotton (Gossypium hirsutum L.).Journal of applied genetics · 2022Article
- Molecular breeding of barley for quality traits and resilience to climate change.Frontiers in genetics · 2022Review
- Genome wide association mapping for agronomic, fruit quality, and root architectural traits in tomato under organic farming conditions.BMC plant biology · 2021Article
- Genome-wide association mapping identifies novel loci underlying fire blight resistance in apple.The plant genome · 2021Article
- Genome-Wide Association Study Identifies Genomic Regions for Important Morpho-Agronomic Traits in Mesoamerican Common Bean.Frontiers in plant science · 2021Article
- Accounting for Population Structure and Phenotypes From Relatives in Association Mapping for Farm Animals: A Simulation Study.Frontiers in genetics · 2021Article
- Genotype networks of 80 quantitative Arabidopsis thaliana phenotypes reveal phenotypic evolvability despite pervasive epistasis.PLoS computational biology · 2020Article
- GWAS: Fast-forwarding gene identification and characterization in temperate Cereals: lessons from Barley - A review.Journal of advanced research · 2020Review
- Genome-Wide Association Study and Identification of Candidate Genes for Nitrogen Use Efficiency in Barley (Frontiers in plant science · 2020Article
Corrections and comments
- Erratum issuedComadran, Jordi [added]; Shaw, Paul [added]; Ramsay, Luke [removed]; Thomas, Bill [removed].
Authors and funding
11 authors.
Funding
Abstract
Genome-wide association study (GWAS) has become an obvious general approach for studying traits of agricultural importance in higher plants, especially crops. Here, we present a GWAS of 32 morphologic and 10 agronomic traits in a collection of 615 barley cultivars genotyped by genome-wide polymorphisms from a recently developed barley oligonucleotide pool assay. Strong population structure effect related to mixed sampling based on seasonal growth habit and ear row number is present in this barley collection. Comparison of seven statistical approaches in a genome-wide scan for significant associations with or without correction for confounding by population structure, revealed that in reducing false positive rates while maintaining statistical power, a mixed linear model solution outperforms genomic control, structured association, stepwise regression control and principal components adjustment. The present study reports significant associations for sixteen morphologic and nine agronomic traits and demonstrates the power and feasibility of applying GWAS to explore complex traits in highly structured plant samples.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.