Evidence map›Paper›PMID 21915152›Full record

ArticleEuropean journal of human genetics : EJHG2012

Parental insertional balanced translocations are an important cause of apparently de novo CNVs in patients with developmental anomalies.

Beata A Nowakowska, Nicole de Leeuw, Claudia Al Ruivenkamp, Birgit Sikkema-Raddatz, John A Crolla, Reinhilde Thoelen, Marije Koopmans, Nicolette den Hollander, Arie van Haeringen, Anne-Marie van der Kevie-Kersemaekers and 8 more

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In one paragraph

Article in European journal of human genetics : EJHG, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 115 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 4 countries.

Beata A NowakowskaDepartment of Human Genetics, KU Leuven, Leuven, Belgium.
Nicole de Leeuw
Claudia Al Ruivenkamp
Birgit Sikkema-Raddatz
John A Crolla
Reinhilde Thoelen
Marije Koopmans
Nicolette den Hollander
Arie van Haeringen
Anne-Marie van der Kevie-Kersemaekers
Rolph Pfundt
Hanneke Mieloo
Ton van Essen
Bert B A de Vries
Andrew Green
Willie Reardon
Jean-Pierre Fryns
Joris R Vermeesch
KU Leuven · BELeiden University Medical Center · NLRadboud University Nijmegen · NLUniversity Medical Center Groningen · NLOur Lady's Hospital · IERadboud University Medical Center · NLSalisbury District Hospital · GBUniversity College Dublin · IEUniversity of Groningen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In several laboratories, genome-wide array analysis has been implemented as the first tier diagnostic test for the identification of copy number changes in patients with mental retardation and/or congenital anomalies. The identification of a pathogenic copy number variant (CNV) is not only important to make a proper diagnosis but also to enable the accurate estimation of the recurrence risk to family members. Upon the identification of a de novo interstitial loss or gain, the risk recurrence is considered very low. However, this risk is 50% if one of the parents is carrier of a balanced insertional translocation (IT). The apparently de novo imbalance in a patient is then the consequence of the unbalanced transmission of a derivative chromosome involved in an IT. To determine the frequency with which insertional balanced translocations would be the origin of submicroscopic imbalances, we investigated the potential presence of an IT in a consecutive series of 477 interstitial CNVs, in which the parental origin has been tested by FISH, among 14,293 patients with developmental abnormalities referred for array. We demonstrate that ITs underlie ~2.1% of the apparently de novo, interstitial CNVs, indicating that submicroscopic ITs are at least sixfold more frequent than cytogenetically visible ITs. This risk estimate should be taken into account during counseling, and warrant parental and proband FISH testing wherever possible in patients with an apparently de novo, interstitial aberration.

Indexed as

DNA Copy Number VariationsMutagenesis, InsertionalTranslocation, GeneticAbnormalities, MultipleDevelopmental DisabilitiesFemaleGenome-Wide Association StudyHumansMalePedigree

Identifiers

PMID21915152
PMCPMC3260932
OpenAlexW2146296139

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.