Evidence map›Paper›PMID 21914818›Full record

ArticleJournal of cell science2011

A BEN-domain-containing protein associates with heterochromatin and represses transcription.

Kizhakke M Sathyan, Zhen Shen, Vidisha Tripathi, Kannanganattu V Prasanth, Supriya G Prasanth

Open access · greenAbstract read
In one paragraph

Article in Journal of cell science, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
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  6. Review
  7. Article
  8. BENDing with Polycomb in pluripotency and cancer.BioEssays : news and reviews in molecular, cellular and developmental biology · 2023
    Article
  9. Review
  10. Article
  11. BEND3 takes the rein.Science China. Life sciences · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. BEND3 safeguards pluripotency by repressing differentiation-associated genes.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  17. Molecular syndromology · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kizhakke M SathyanDepartment of Cell and Developmental Biology, University of Illinois, Urbana, IL 61801, USA.
Zhen Shen
Vidisha Tripathi
Kannanganattu V Prasanth
Supriya G Prasanth
University of Illinois Urbana-Champaign · US

Funding

Characterization of nuclear retained RNA-mediated gene regulatory mechanismR01GM088252 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KANNANGANATTU, PRASANTH KUMAR VIJAYAN · 2011 to 2015
$1.4M
NIGMS NIH HHS R01 GM088252
6 · The paper itself

Abstract

In eukaryotes, higher order chromatin structure governs crucial cellular processes including DNA replication, transcription and post-transcriptional gene regulation. Specific chromatin-interacting proteins play vital roles in the maintenance of chromatin structure. We have identified BEND3, a quadruple BEN domain-containing protein that is highly conserved amongst vertebrates. BEND3 colocalizes with HP1 and H3 trimethylated at K9 at heterochromatic regions in mammalian cells. Using an in vivo gene locus, we have been able to demonstrate that BEND3 associates with the locus only when it is heterochromatic and dissociates upon activation of transcription. Furthermore, tethering BEND3 inhibits transcription from the locus, indicating that BEND3 is involved in transcriptional repression through its interaction with histone deacetylases and Sall4, a transcription repressor. We further demonstrate that BEND3 is SUMOylated and that such modifications are essential for its role in transcriptional repression. Finally, overexpression of BEND3 causes premature chromatin condensation and extensive heterochromatinization, resulting in cell cycle arrest. Taken together, our data demonstrate the role of a novel heterochromatin-associated protein in transcriptional repression.

Indexed as

AnimalsCell LineDNA-Binding ProteinsEndodeoxyribonucleasesEndoribonucleasesEvolution, MolecularHeterochromatinHistone DeacetylasesHumansMicePhylogenyProtein BindingRepressor ProteinsSumoylationTranscription FactorsTranscription, GeneticBEND3 protein, humanBEND3 protein, mouseDNA-Binding ProteinsEndodeoxyribonucleasesEndoribonucleasesHeterochromatinHistone DeacetylasesRepressor ProteinsSALL4 protein, humanSerratia marcescens nucleaseTranscription Factors

Identifiers

PMID21914818
PMCPMC4074281
OpenAlexW2104677263

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.