Evidence map›Paper›PMID 21914808›Full record

ArticleThe Journal of biological chemistry2011

Dihydroceramide-based response to hypoxia.

Cecilia M Devlin, Tim Lahm, Walter C Hubbard, Mary Van Demark, Kevin C Wang, Xue Wu, Alicja Bielawska, Lina M Obeid, Mircea Ivan, Irina Petrache

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 76 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Sphingolipid signaling in kidney diseases.American journal of physiology. Renal physiology · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Ceramides and Acute Kidney Injury.Seminars in nephrology · 2022
    Review
  14. Involvement of Ceramide Metabolism in Cerebral Ischemia.Frontiers in molecular biosciences · 2022
    Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Cecilia M DevlinDepartment of Medicine, Indiana University, Indianapolis, Indiana 46202.
Tim LahmDepartment of Medicine, Indiana University, Indianapolis, Indiana 46202; R. L. Roudebush Veterans Affairs Medical Center, Indianapolis, Indiana 46202.
Walter C HubbardDepartment of Medicine, The Johns Hopkins University, Baltimore, Maryland 21286.
Mary Van DemarkDepartment of Medicine, Indiana University, Indianapolis, Indiana 46202.
Kevin C WangDepartment of Medicine, Indiana University, Indianapolis, Indiana 46202.
Xue WuDepartment of Microbiology and Immunology, Indiana University, Indianapolis, Indiana 46202.
Alicja BielawskaDepartment of Pediatrics, Medical University of South Carolina, Charleston, South Carolina 29425.
Lina M ObeidDepartment of Pediatrics, Medical University of South Carolina, Charleston, South Carolina 29425.
Mircea IvanDepartment of Medicine, Indiana University, Indianapolis, Indiana 46202; Department of Microbiology and Immunology, Indiana University, Indianapolis, Indiana 46202. Electronic address: mivan@iupui.edu.
Irina PetracheDepartment of Medicine, Indiana University, Indianapolis, Indiana 46202; R. L. Roudebush Veterans Affairs Medical Center, Indianapolis, Indiana 46202. Electronic address: ipetrach@iupui.edu.
Indiana University – Purdue University Indianapolis · USMedical University of South Carolina · USRichard L. Roudebush VA Medical Center · USJohns Hopkins University · US

Funding

Ceramide-induced Lung Destruction in EmphysemaR01HL077328 · NHLBI · NATIONAL JEWISH HEALTH · PI PETRACHE, IRINA · 2006 to 2024
$8.0M
Molecular mechanism of alveolar injury caused by cigarette smokeR21DA029249 · NIDA · INDIANA UNIVERSITY INDIANAPOLIS · PI PETRACHE, IRINA · 2010 to 2011
$418k
Micromass Quattro API TSQ For LC-MS/MS QuantitationS10RR016798 · NCRR · JOHNS HOPKINS UNIVERSITY · PI HUBBARD, WALTER C · 2002 to 2002
$340k
NCRR NIH HHS 1S10RR16798NHLBI NIH HHS R01 HL077328NHLBI NIH HHS R01HL077328NIDA NIH HHS R21 DA029249
6 · The paper itself

Abstract

To understand the mechanisms of ceramide-based responses to hypoxia, we performed a mass spectrometry-based survey of ceramide species elicited by a wide range of hypoxic conditions (0.2-5% oxygen). We describe a rapid, time-dependent, marked up-regulation of dihydroceramides (DHCs) in mammalian cells and in the lungs of hypoxic rats. The increase affected all DHC species and was proportional with the depth and duration of hypoxia, ranging from 2- (1 h) to 10-fold (24 h), with complete return to normal after 1 h of reoxygenation at the expense of increased ceramides. We demonstrate that a DHC-based response to hypoxia occurs in a hypoxia-inducible factor-independent fashion and is catalyzed by the DHC desaturase (DEGS) in the de novo ceramide pathway. Both the impact of hypoxia on DHC molecular species and its inhibitory effect on cell proliferation were reproduced by knockdown of DEGS1 or DEGS2 by siRNA during normoxia. Conversely, overexpression of DEGS1 or DEGS2 attenuated the DHC accumulation and increased cell proliferation during hypoxia. Based on the amplitude and kinetics of DHC accumulation, the enzymatic desaturation of DHCs fulfills the criteria of an oxygen sensor across physiological hypoxic conditions, regulating the balance between biologically active components of ceramide metabolism.

Indexed as

HypoxiaAnimalsBiosensing TechniquesCell Line, TumorCell ProliferationCeramidesDose-Response Relationship, DrugHumansKineticsMaleMass SpectrometryMiceOxidoreductasesOxygenRatsRats, Sprague-DawleyCeramidesdihydroceramidedihydroceramide desaturaseOxidoreductasesOxygenRNA, Small Interfering

Identifiers

PMID21914808
PMCPMC3207482
OpenAlexW1964076699

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.