Evidence map›Paper›PMID 21911483›Full record

ArticleThe Journal of general physiology2011

Potassium-selective block of barium permeation through single KcsA channels.

Kene N Piasta, Douglas L Theobald, Christopher Miller

Abstract read
In one paragraph

Article in The Journal of general physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Selectivity filter ion binding affinity determines inactivation in a potassium channel.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  6. A Functional KViruses · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Queueing arrival and release mechanism for KThe journal of physiological sciences : JPS · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Pore size matters for potassium channel conductance.The Journal of general physiology · 2016
    Review
  16. Article
  17. Article
  18. Designer and natural peptide toxin blockers of the KcsA potassium channel identified by phage display.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  19. Review
  20. Two-sided block of a dual-topology F- channel.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kene N PiastaDepartment of Biochemistry, Howard Hughes Medical Institute, Brandeis University, Waltham, MA 02454, USA.
Douglas L Theobald
Christopher Miller

Funding

Macromolecular Structure MechanismT32GM007596 · NIGMS · BRANDEIS UNIVERSITY · PI OPRIAN, DANIEL D · 1985 to 2019
$4.5M
Evolution of enzyme structure and function viewed at atomic resolutionR01GM096053 · NIGMS · BRANDEIS UNIVERSITY · PI Douglas Lowell Theobald · 2011 to 2026
$3.6M
Bayesian analysis of structural shape and conformationR01GM094468 · NIGMS · BRANDEIS UNIVERSITY · PI THEOBALD, DOUGLAS LOWELL · 2010 to 2014
$1.4M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM094468NIGMS NIH HHS R01 GM096053NIGMS NIH HHS T32 GM007596
6 · The paper itself

Abstract

Ba(2+), a doubly charged analogue of K(+), specifically blocks K(+) channels by virtue of electrostatic stabilization in the permeation pathway. Ba(2+) block is used here as a tool to determine the equilibrium binding affinity for various monovalent cations at specific sites in the selectivity filter of a noninactivating mutant of KcsA. At high concentrations of external K(+), the block-time distribution is double exponential, marking at least two Ba(2+) sites in the selectivity filter, in accord with a Ba(2+)-containing crystal structure of KcsA. By analyzing block as a function of extracellular K(+), we determined the equilibrium dissociation constant of K(+) and of other monovalent cations at an extracellular site, presumably S1, to arrive at a selectivity sequence for binding at this site: Rb(+) (3 µM) > Cs(+) (23 µM) > K(+) (29 µM) > NH(4)(+) (440 µM) >> Na(+) and Li(+) (>1 M). This represents an unusually high selectivity for K(+) over Na(+), with |ΔΔG(0)| of at least 7 kcal mol(-1). These results fit well with other kinetic measurements of selectivity as well as with the many crystal structures of KcsA in various ionic conditions.

Indexed as

Bacterial ProteinsBariumBinding SitesCell MembraneCesiumDose-Response Relationship, DrugEscherichia coliGene Expression Regulation, BacterialMutagenesis, Site-DirectedMutationPermeabilityPotassiumPotassium Channels, Voltage-GatedQuaternary Ammonium CompoundsRubidiumBacterial ProteinsBariumCesiumKcsA protein, Streptomyces coelicolorPotassiumPotassium Channels, Voltage-GatedQuaternary Ammonium CompoundsRubidium

Identifiers

PMID21911483
PMCPMC3182450

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.