Evidence map›Paper›PMID 21911364›Full record

ArticleNucleic acids research2011

Daedalus: a robust, turnkey platform for rapid production of decigram quantities of active recombinant proteins in human cell lines using novel lentiviral vectors.

Ashok D Bandaranayake, Colin Correnti, Byoung Y Ryu, Michelle Brault, Roland K Strong, David J Rawlings

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 88 citations in OpenAlex.

  1. Trial
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  8. Antibody reactivity against EBNA1 and GlialCAM differentiates multiple sclerosis patients from healthy controls.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Multiplex, multimodal mapping of variant effects in secreted proteins.bioRxiv : the preprint server for biology · 2025
    Article
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  19. CD90-targeted lentiviral vectors for HSC gene therapy.Molecular therapy : the journal of the American Society of Gene Therapy · 2023
    Article
  20. Siderocalin fusion proteins enable a newRSC chemical biology · 2023
    Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ashok D BandaranayakeDepartment of Immunology, University of Washington, Seattle, WA 98195, USA.
Colin Correnti
Byoung Y Ryu
Michelle Brault
Roland K Strong
David J Rawlings
Fred Hutch Cancer Center · USSeattle Children's Hospital · US

Funding

CORE--VECTOR PRODUCTIONP30DK056465 · NIDDK · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HEIMFELD, SHELLY · 1999 to 2014
$14.9M
Cell and Virus COREPL1HL092557 · NHLBI · SEATTLE CHILDREN'S HOSPITAL · PI RAWLINGS, DAVID J · 2007 to 2011
$4.3M
Structure/function studies of CTLD NK immunoreceptorsR01AI048675 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STRONG, ROLAND K · 2001 to 2010
$3.1M
IRON LIPOCALIN NGAL IN KIDNEY DISEASER01DK073462 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BARASCH, JONATHAN M. · 2007 to 2015
$3.0M
REGULATION OF B CELL DEVELOPMENT AND SIGNALING BY BTKR01HD037091 · NICHD · UNIVERSITY OF WASHINGTON · PI RAWLINGS, DAVID J · 1999 to 2008
$2.7M
Design and function of flagellin-based immunogens for broadly neutralizing immuniR01AI084803 · NIAID · UNIVERSITY OF WASHINGTON · PI SMITH, KELLY D · 2009 to 2013
$2.7M
Lentiviral Gene Therapy of X-Linked AgammaglobulinemiaR01AI084457 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI RAWLINGS, DAVID J · 2012 to 2015
$2.5M
Microbial siderophore-specific innate immune responsesR01AI059432 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STRONG, ROLAND K · 2005 to 2008
$1.1M
NHLBI NIH HHS HL092557NIAID NIH HHS AI084803NIAID NIH HHS AI48675NIAID NIH HHS AI59432NIAID NIH HHS R01 AI084457NICHD NIH HHS HD037091NICHD NIH HHS HD075453NIDDK NIH HHS DK073462NIDDK NIH HHS DK56465
6 · The paper itself

Abstract

A key challenge for the academic and biopharmaceutical communities is the rapid and scalable production of recombinant proteins for supporting downstream applications ranging from therapeutic trials to structural genomics efforts. Here, we describe a novel system for the production of recombinant mammalian proteins, including immune receptors, cytokines and antibodies, in a human cell line culture system, often requiring <3 weeks to achieve stable, high-level expression: Daedalus. The inclusion of minimized ubiquitous chromatin opening elements in the transduction vectors is key for preventing genomic silencing and maintaining the stability of decigram levels of expression. This system can bypass the tedious and time-consuming steps of conventional protein production methods by employing the secretion pathway of serum-free adapted human suspension cell lines, such as 293 Freestyle. Using optimized lentiviral vectors, yields of 20-100 mg/l of correctly folded and post-translationally modified, endotoxin-free protein of up to ~70 kDa in size, can be achieved in conventional, small-scale (100 ml) culture. At these yields, most proteins can be purified using a single size-exclusion chromatography step, immediately appropriate for use in structural, biophysical or therapeutic applications.

Indexed as

Acute-Phase ProteinsAnimalsCell LineCrystallographyCytokinesGenetic TechniquesGenetic VectorsHumansLentivirusLipocalin-2LipocalinsMiceOncogene ProteinsRecombinant ProteinsTransduction, GeneticAcute-Phase ProteinsCytokinesLcn2 protein, mouseLipocalin-2LipocalinsOncogene ProteinsRecombinant Proteins

Identifiers

PMID21911364
PMCPMC3241668
OpenAlexW2138387058

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.