Evidence map›Paper›PMID 21910892›Full record

ArticleBMC infectious diseases2011

Characteristics of pncA mutations in multidrug-resistant tuberculosis in Taiwan.

Yu-Chi Chiu, Shiang-Fen Huang, Kwok-Woon Yu, Yu-Chin Lee, Jia-Yih Feng, Wei-Juin Su

Abstract readEvaluation Study
In one paragraph

Article in BMC infectious diseases, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Genome analyses of 174 strains ofMicrobial genomics · 2021
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  13. Epidemiology of pyrazinamide-resistant tuberculosis in the United States, 1999-2009.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yu-Chi ChiuDepartment of Chest Medicine, Taipei Veterans General Hospital, Shih-Pai Rd,, Taipei 112, Taiwan, ROC.
Shiang-Fen Huang
Kwok-Woon Yu
Yu-Chin Lee
Jia-Yih Feng
Wei-Juin Su

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPyrazinamide (PZA) is an important first-line drug in multidrug-resistant tuberculosis (MDRTB) treatment. However, the unreliable results obtained from traditional susceptibility testing limits its usefulness in clinical settings. The detection of pncA gene mutations is a potential surrogate of PZA susceptibility testing, especially in MDRTB isolates. The impact of genotypes of M. tuberculosis in pncA gene mutations also remains to be clarified.

methodsMDRTB isolates were collected from six hospitals in Taiwan from January 2007 to December 2009. pncA gene sequencing, pyrazinamidase activity testing, and spoligotyping were performed on all of the isolates. PZA susceptibility was determined by the BACTEC MGIT 960 PZA method. The sensitivity and specificity of pncA gene analysis were estimated based on the results of PZA susceptibility testing.

resultsA total of 66 MDRTB isolates, including 37 Beijing and 29 non-Beijing strains, were included for analysis. Among these isolates, 36 (54.5%) were PZA-resistant and 30 (45.5%) were PZA-susceptible. The PZA-resistant isolates were more likely to have concomitant resistance to ethambutol and streptomycin. Thirty-seven mutation types out of 30 isolates were identified in the pncA gene, and most of them were point mutations. The sensitivities of pncA gene sequencing for PZA susceptibility in overall isolates, Beijing and non-Beijing strains were 80.6%, 76.2%, and 86.7% respectively, and the specificities were 96.7%, 93.8%, and 100% respectively.

conclusionsMore than half of the MDRTB isolates in this study are PZA-resistant. Analysis of pncA gene mutations helped to identify PZA-susceptible MDRTB isolates, especially in non-Beijing strains.

Indexed as

Drug Resistance, Multiple, BacterialMutation, MissenseAdultAgedAmidohydrolasesDNA, BacterialFemaleHumansMaleMicrobial Sensitivity TestsMiddle AgedMolecular TypingMycobacterium tuberculosisSensitivity and SpecificitySequence Analysis, DNATaiwanAmidohydrolasesDNA, BacterialPncA protein, Mycobacterium tuberculosispyrazinamide deamidase

Identifiers

PMID21910892
PMCPMC3180675

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.