Evidence map›Paper›PMID 21909832›Full record

ArticleFolia microbiologica2011

Emergence of Aureobasidium pullulans as human fungal pathogen and molecular assay for future medical diagnosis.

Giek Far Chan, Mohamad Safwan Ahmad Puad, Chai Fung Chin, Noor Aini Abdul Rashid

Abstract read
PubMed Publisher
In one paragraph

Article in Folia microbiologica, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 41 citations in OpenAlex.

  1. First case ofMedical mycology case reports · 2025
    Article
  2. Introducing two new genera,Fungal systematics and evolution · 2025
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Virulence Traits and Population Genomics of the Black YeastJournal of fungi (Basel, Switzerland) · 2021
    Article
  8. Modified Rhodopsins FromFrontiers in molecular biosciences · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Giek Far ChanNanoporous Materials for Biological Application Research Group (NAMBAR), Sustainability Research Alliance, Universiti Teknologi Malaysia, 81310 UTM Johor Bahru, Johor, Malaysia. giekfar@utm.my
Mohamad Safwan Ahmad Puad
Chai Fung Chin
Noor Aini Abdul Rashid
University of Technology Malaysia · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite the great importance of Aureobasidium pullulans in biotechnology, the fungus had emerged as an opportunistic human pathogen, especially among immunocompromised patients. Clinical detection of this rare human fungal pathogen presently relies on morphology diagnosis which may be misleading. Thus, a sensitive and accurate quantitative molecular assay for A. pullulans remains lacking. In this study, we presented the microscopy observations of A. pullulans that reveals the phenotypic plasticity of the fungus. A. pullulans-specific primers and molecular beacon probes were designed based on the fungal 18S ribosomal RNA (rRNA) gene. Comparison of two probes with varied quencher chemistry, namely BHQ-1 and Tamra, revealed high amplification efficiency of 104% and 108%, respectively. The optimized quantitative real-time PCR (qPCR) assays could detect and quantify up to 1 pg concentration of A. pullulans DNA. Both assays displayed satisfactory performance parameters at fast thermal cycling mode. The molecular assay has great potential as a molecular diagnosis tool for early detection of fungal infection caused by A. pullulans, which merits future study in clinical diagnosis.

Indexed as

Biological AssayAscomycotaBase SequenceDNA, FungalDNA ProbesEarly DiagnosisHumansImmunocompromised HostMicroscopyMolecular Sequence DataMycosesOpportunistic InfectionsPhenotypePhylogenyReal-Time Polymerase Chain ReactionRhodamines5-carboxytetramethylrhodamine succinimidyl esterDNA, FungalDNA ProbesRhodaminesRNA, Ribosomal, 18S

Identifiers

PMID21909832
OpenAlexW2017658298

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.