Evidence map›Paper›PMID 21909108›Full record

SynthesisNature genetics2011

Meta-analysis of genome-wide association studies from the CHARGE consortium identifies common variants associated with carotid intima media thickness and plaque.

Joshua C Bis, Maryam Kavousi, Nora Franceschini, Aaron Isaacs, Gonçalo R Abecasis, Ulf Schminke, Wendy S Post, Albert V Smith, L Adrienne Cupples, Hugh S Markus and 84 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 132 papers, 18 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed, 18 pooled it
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

132 citing papers in PubMed, 18 syntheses or guidelines pooled it, 214 citations in OpenAlex.

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  13. Overlap between common genetic polymorphisms underpinning kidney traits and cardiovascular disease phenotypes: the CKDGen consortium.American journal of kidney diseases : the official journal of the National Kidney Foundation · 2013
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72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

94 authors at 20 institutions in 9 countries.

Joshua C BisCardiovascular Health Research Unit and Department of Medicine, University of Washington, Seattle, Washington, USA. joshbis@uw.edu
Maryam Kavousi
Nora Franceschini
Aaron Isaacs
Gonçalo R Abecasis
Ulf Schminke
Wendy S Post
Albert V Smith
L Adrienne Cupples
Hugh S Markus
Reinhold Schmidt
Jennifer E Huffman
Terho Lehtimäki
Jens Baumert
Thomas Münzel
Susan R Heckbert
Abbas Dehghan
Kari North
Ben Oostra
Steve Bevan
Eva-Maria Stoegerer
Caroline Hayward
Olli Raitakari
Christa Meisinger
Arne Schillert
Serena Sanna
Henry Völzke
Yu-Ching Cheng
Bolli Thorsson
Caroline S Fox
Kenneth Rice
Fernando Rivadeneira
Vijay Nambi
Eran Halperin
Katja E Petrovic
Leena Peltonen
H Erich Wichmann
Renate B Schnabel
Marcus Dörr
Afshin Parsa
Thor Aspelund
Serkalem Demissie
Sekar Kathiresan
Muredach P Reilly
Kent Taylor
Andre Uitterlinden
David J Couper
Matthias Sitzer
Mika Kähönen
Thomas Illig
Philipp S Wild
Marco Orru
Jan Lüdemann
Alan R Shuldiner
Gudny Eiriksdottir
Charles C White
Jerome I Rotter
Albert Hofman
Jochen Seissler
Tanja Zeller
Gianluca Usala
Florian Ernst
Lenore J Launer
Ralph B D'Agostino
Daniel H O'Leary
Christie Ballantyne
Joachim Thiery
Andreas Ziegler
Edward G Lakatta
Ravi Kumar Chilukoti
Tamara B Harris
Philip A Wolf
Bruce M Psaty
Joseph F Polak
Xia Li
Wolfgang Rathmann
Manuela Uda
Eric Boerwinkle
Norman Klopp
Helena Schmidt
James F Wilson
Jorma Viikari
Wolfgang Koenig
Stefan Blankenberg
Anne B Newman
Jacqueline Witteman
Gerardo Heiss
Cornelia van Duijn
Angelo Scuteri
Georg Homuth
Braxton D Mitchell
Vilmundur Gudnason
Christopher J O'Donnell
CARDIoGRAM Consortium
Universität Greifswald · DEHelmholtz Zentrum München · DEUniversity of North Carolina at Chapel Hill · USBoston University · USIcelandic Heart Association · ISInstitute of Genetic and Biomedical Research · ITMedical University of Graz · ATNetherlands Consortium for Healthy Ageing · NLUniversity of Maryland, Baltimore · USErasmus MC · NLJohannes Gutenberg University Mainz · DEUniversity of Washington · USBaylor College of Medicine · USCedars-Sinai Medical Center · USCentre for Medical Systems Biology · NLInstitute on Aging · USMedical Research Council · GBNational Institute on Aging · USSt George's, University of London · GBUniversity Medical Center of the Johannes Gutenberg University Mainz · DE

Funding

Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PETER J TONTONOZ · 2003 to 2026
$40.4M
PRECURSORS OF STROKE INCIDENCE AND PROGNOSISR01NS017950 · NINDS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Hugo Javier Aparicio, Jose Rafael Romero · 1985 to 2026
$22.9M
ZORVIRAX ORAL SUSPENSION FOR SEVERE CHILDHOOD HERPES VIRUS INFECTIONSM01RR000069 · NCRR · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 1985 to 2008
$22.1M
Genome-Wide Association Analysis in Essential Hypertension (FEHGAS study)R01HL086694 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ARAVINDA CHAKRAVARTI · 2007 to 2026
$21.2M
Zonulin Antibodies in Intestinal Permeabilitiy in IDDMM01RR016500 · NCRR · UNIVERSITY OF MARYLAND BALTIMORE · PI OSWALD, LYNN M · 2002 to 2009
$20.2M
Research BaseP30DK072488 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI MITCHELL, BRAXTON D, TAYLOR, SIMEON I. · 2005 to 2019
$17.3M
EPIDEMIOLOGY OF DEMENTIA IN THE FRAMINGHAM STUDYR01AG008122 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI AU, RHODA, SESHADRI, SUDHA · 1989 to 2015
$14.4M
MRI, Genetics &Cognitive Precursors of AD &DementiaR01AG016495 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI AU, RHODA · 1999 to 2016
$12.5M
Epidemiology of Venous Thrombosis & Pulmonary EmbolismR01HL059367 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI TANG, WEIHONG · 1998 to 2024
$11.8M
Genome-wide Search for CVD Gene-Environment InteractionsU01HL072515 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI SHULDINER, ALAN R. · 2002 to 2008
$11.2M
Chief Scientist Office CZB/4/710Intramural NIH HHS Z01 HL006002Intramural NIH HHS Z99 HL999999Medical Research Council MC_PC_U127561128Medical Research Council MC_U127561128NCATS NIH HHS UL1 TR000005NCRR NIH HHS M01 RR000069NCRR NIH HHS M01RR00069NCRR NIH HHS M01 RR016500NCRR NIH HHS M01 RR 16500NCRR NIH HHS UL1 RR025005NCRR NIH HHS UL1RR025005NHGRI NIH HHS HG005581NHGRI NIH HHS RC2 HG005581NHGRI NIH HHS U01 HG004402NHGRI NIH HHS U01HG004402NHLBI NIH HHS HL075366NHLBI NIH HHS HL080295NHLBI NIH HHS HL084729NHLBI NIH HHS HL087652NHLBI NIH HHS HL105756NHLBI NIH HHS N01 HC015103NHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01 HC035129NHLBI NIH HHS N01 HC045133NHLBI NIH HHS N01 HC055015NHLBI NIH HHS N01 HC055016NHLBI NIH HHS N01 HC055018NHLBI NIH HHS N01 HC055019NHLBI NIH HHS N01 HC055020NHLBI NIH HHS N01 HC055021NHLBI NIH HHS N01 HC055022NHLBI NIH HHS N01 HC055222NHLBI NIH HHS N01 HC075150NHLBI NIH HHS N01 HC085079NHLBI NIH HHS N01 HC085086NHLBI NIH HHS N01-HC-25195NHLBI NIH HHS N01-HC-55015NHLBI NIH HHS N01-HC-55016NHLBI NIH HHS N01-HC-55018NHLBI NIH HHS N01-HC-55019NHLBI NIH HHS N01-HC-55020NHLBI NIH HHS N01-HC-55021NHLBI NIH HHS N01-HC-55022NHLBI NIH HHS N01 HC-55222NHLBI NIH HHS N01-HC-75150NHLBI NIH HHS N01-HC-85079NHLBI NIH HHS N01-HC-85080NHLBI NIH HHS N01-HC-85081NHLBI NIH HHS N01-HC-85082NHLBI NIH HHS N01-HC-85083NHLBI NIH HHS N01-HC-85084NHLBI NIH HHS N01-HC-85085NHLBI NIH HHS N01-HC-85086NHLBI NIH HHS N01-HC-85239NHLBI NIH HHS N02-HL-6-4278NHLBI NIH HHS R01 HL059367NHLBI NIH HHS R01 HL075366NHLBI NIH HHS R01 HL080295NHLBI NIH HHS R01 HL086694NHLBI NIH HHS R01HL086694NHLBI NIH HHS R01 HL087641NHLBI NIH HHS R01HL087641NHLBI NIH HHS R01 HL087652NHLBI NIH HHS R01 HL088119NHLBI NIH HHS R01 HL105756NHLBI NIH HHS R01HL59367NHLBI NIH HHS U01 HL072515NHLBI NIH HHS U01 HL072515-06NHLBI NIH HHS U01 HL080295NHLBI NIH HHS U01 HL084729NIA NIH HHS AG-023629NIA NIH HHS AG-027058NIA NIH HHS AG033193NIA NIH HHS AG08122NIA NIH HHS AG16495NIA NIH HHS AG-20098NIA NIH HHS N01 AG012100NIA NIH HHS N01-AG-1-2109NIA NIH HHS R01 AG008122NIA NIH HHS R01 AG015928NIA NIH HHS R01 AG016495NIA NIH HHS R01 AG018728NIA NIH HHS R01 AG020098NIA NIH HHS R01 AG023629NIA NIH HHS R01 AG027058NIA NIH HHS R01 AG033193NIA NIH HHS R01 AG18728NIA NIH HHS R56 AG020098NIA NIH HHS R56 AG023629NIDDK NIH HHS DK063491NIDDK NIH HHS P30 DK063491NIDDK NIH HHS P30 DK072488NIGMS NIH HHS U01 GM074518NIGMS NIH HHS U01 GM074518-04NINDS NIH HHS NS17950NINDS NIH HHS R01 NS017950PHS HHS 268200625226CWellcome Trust
6 · The paper itself

Abstract

Carotid intima media thickness (cIMT) and plaque determined by ultrasonography are established measures of subclinical atherosclerosis that each predicts future cardiovascular disease events. We conducted a meta-analysis of genome-wide association data in 31,211 participants of European ancestry from nine large studies in the setting of the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium. We then sought additional evidence to support our findings among 11,273 individuals using data from seven additional studies. In the combined meta-analysis, we identified three genomic regions associated with common carotid intima media thickness and two different regions associated with the presence of carotid plaque (P < 5 × 10(-8)). The associated SNPs mapped in or near genes related to cellular signaling, lipid metabolism and blood pressure homeostasis, and two of the regions were associated with coronary artery disease (P < 0.006) in the Coronary Artery Disease Genome-Wide Replication and Meta-Analysis (CARDIoGRAM) consortium. Our findings may provide new insight into pathways leading to subclinical atherosclerosis and subsequent cardiovascular events.

Indexed as

Carotid Intima-Media ThicknessAdultAgedAgingAtherosclerosisCohort StudiesCoronary Artery DiseaseGenetic LociGenetic Predisposition to DiseaseGenome, HumanGenome-Wide Association StudyGenotypeHeartHumansMiddle AgedPhenotype

Identifiers

PMID21909108
PMCPMC3257519
OpenAlexW2169832447

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.