Evidence map›Paper›PMID 21908722›Full record

ArticleThe Plant cell2011

Boron-dependent degradation of NIP5;1 mRNA for acclimation to excess boron conditions in Arabidopsis.

Mayuki Tanaka, Junpei Takano, Yukako Chiba, Fabien Lombardo, Yuki Ogasawara, Hitoshi Onouchi, Satoshi Naito, Toru Fujiwara

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 127 citations in OpenAlex.

  1. Article
  2. Convergent evolution increases boron transport through SNPs and tandem duplications atProceedings of the National Academy of Sciences of the United States of America · 2026
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  8. Review
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  14. Three regions of thePlant signaling & behavior · 2021
    Article
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  18. Article
  19. uORFs: ImportantInternational journal of molecular sciences · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Mayuki TanakaGraduate School of Agricultural and Life Science, University of Tokyo, Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
Junpei Takano
Yukako Chiba
Fabien Lombardo
Yuki Ogasawara
Hitoshi Onouchi
Satoshi Naito
Toru Fujiwara
Hokkaido University · JPThe University of Tokyo · JPTokyo University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Boron (B) is an essential plant micronutrient that is toxic at higher levels. NIP5;1 is a boric acid channel required for B uptake and growth under B deficiency. Accumulation of the NIP5;1 transcript is upregulated under B deficiency in Arabidopsis thaliana roots. To elucidate the mechanism of regulation, the 5' untranslated region (UTR) of NIP5;1 was tested for its ability to confer B-dependent regulation using β-glucuronidase and green fluorescent protein as reporters. This analysis showed that the 5' UTR was involved in NIP5;1 transcript accumulation in response to B conditions. We also found that high-B conditions trigger NIP5;1 mRNA degradation and that the sequence from +182 to +200 bp in the 5' UTR is required for this mRNA destabilization. In the nip5;1-1 mutant background, a NIP5;1 complementation construct without the 5' UTR produced high levels of mRNA accumulation, increased B concentrations in tissues, and reduced growth under high-B conditions. These data suggest that the 5' UTR controls B-dependent NIP5;1 mRNA degradation and that NIP5;1 mRNA degradation is important for plant acclimation to high-B conditions.

Indexed as

AcclimatizationRNA Stability5' Untranslated RegionsAquaporinsArabidopsisArabidopsis ProteinsBoronGene Expression Regulation, PlantMolecular Sequence DataPlant RootsPlants, Genetically ModifiedPromoter Regions, GeneticRNA, MessengerRNA, Plant5' Untranslated RegionsAquaporinsArabidopsis ProteinsBoronNIP5;1 protein, ArabidopsisRNA, MessengerRNA, Plant

Identifiers

PMID21908722
PMCPMC3203445
OpenAlexW2128621883

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.