Evidence map›Paper›PMID 21908660›Full record

ArticleJournal of bacteriology2011

Decay of a model mRNA in Bacillus subtilis by a combination of RNase J1 5' exonuclease and RNase Y endonuclease activities.

Shiyi Yao, Jamie Richards, Joel G Belasco, David H Bechhofer

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Initiation of mRNA decay in bacteria.Cellular and molecular life sciences : CMLS · 2014
    Review
  9. Nucleotide specificity in bacterial mRNA recycling.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Shiyi YaoDepartment of Pharmacology and Systems Therapeutics, Box 1603, Mount Sinai School of Medicine, New York, NY 10029, USA.
Jamie Richards
Joel G Belasco
David H Bechhofer
Icahn School of Medicine at Mount Sinai · USNew York University · US

Funding

Prokaryotic RNA Metabolism - Resubmission - 1R01GM035769 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BELASCO, JOEL G · 1986 to 2021
$7.1M
INITIATION OF MRNA DECAY IN BACILLUS SUBTILISR01GM048804 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BECHHOFER, DAVID H · 1993 to 2010
$2.9M
NIGMS NIH HHS GM35769NIGMS NIH HHS GM48804NIGMS NIH HHS R01 GM035769NIGMS NIH HHS R01 GM048804
6 · The paper itself

Abstract

The involvement of the recently characterized 5' exonuclease activity of RNase J1 and endonuclease activity of RNase Y in the turnover of ΔermC mRNA in Bacillus subtilis was investigated. Evidence is presented that both of these activities determine the half-life of ΔermC mRNA.

Indexed as

Bacillus subtilisBacterial ProteinsBase SequenceEndoribonucleasesExoribonucleasesMolecular Sequence DataNucleic Acid ConformationRNA, BacterialRNA, MessengerRNA StabilityBacterial ProteinsEndoribonucleasesExoribonucleasesRNA, BacterialRNA, Messenger

Identifiers

PMID21908660
PMCPMC3209221
OpenAlexW2092143714

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.