Evidence map›Paper›PMID 21908625›Full record

ArticleApplied and environmental microbiology2011

The RNA polymerase omega factor RpoZ is regulated by PhoP and has an important role in antibiotic biosynthesis and morphological differentiation in Streptomyces coelicolor.

Fernando Santos-Beneit, Mónica Barriuso-Iglesias, Lorena T Fernández-Martínez, Miriam Martínez-Castro, Alberto Sola-Landa, Antonio Rodríguez-García, Juan F Martín

Abstract read
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Article in Applied and environmental microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Review
  2. Article
  3. Frontiers in microbiology · 2023
    Article
  4. Two-Component Systems ofInternational journal of molecular sciences · 2022
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Acclimation to High COPlant physiology · 2017
    Article
  12. Article
  13. Review
  14. Article
  15. Triggers and cues that activate antibiotic production by actinomycetes.Journal of industrial microbiology & biotechnology · 2014
    Review
  16. Review
  17. Article
  18. Review
  19. Molecular regulation of antibiotic biosynthesis in streptomyces.Microbiology and molecular biology reviews : MMBR · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fernando Santos-BeneitInstitute of Biotechnology-INBIOTEC, Avda. Real 1, 24006 León, Spain.
Mónica Barriuso-Iglesias
Lorena T Fernández-Martínez
Miriam Martínez-Castro
Alberto Sola-Landa
Antonio Rodríguez-García
Juan F Martín

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The RNA polymerase (RNAP) omega factor (ω) forms a complex with the α₂ββ' core of this enzyme in bacteria. We have characterized the rpoZ gene of Streptomyces coelicolor, which encodes a small protein (90 amino acids) identified as the omega factor. Deletion of the rpoZ gene resulted in strains with a slightly reduced growth rate, although they were still able to sporulate. The biosynthesis of actinorhodin and, particularly, that of undecylprodigiosin were drastically reduced in the ΔrpoZ strain, suggesting that expression of these secondary metabolite biosynthetic genes is dependent upon the presence of RpoZ in the RNAP complex. Complementation of the ΔrpoZ mutant with the wild-type rpoZ allele restored both phenotype and antibiotic production. Interestingly, the rpoZ gene contains a PHO box in its promoter region. DNA binding assays showed that the phosphate response regulator PhoP binds to such a region. Since luciferase reporter studies showed that rpoZ promoter activity was increased in a ΔphoP background, it can be concluded that rpoZ is controlled negatively by PhoP, thus connecting phosphate depletion regulation with antibiotic production and morphological differentiation in Streptomyces.

Indexed as

Gene Expression Regulation, BacterialAnthraquinonesAnti-Bacterial AgentsBacterial ProteinsBenzoisochromanequinonesDNA-Directed RNA PolymerasesGene DeletionGenetic Complementation TestProdigiosinPromoter Regions, GeneticProtein BindingSigma FactorStreptomyces coelicoloractinorhodinAnthraquinonesAnti-Bacterial AgentsBacterial ProteinsBenzoisochromanequinonesDNA-Directed RNA PolymerasesPhoP protein, BacteriaProdigiosinSigma Factorundecylprodigiosin

Identifiers

PMID21908625
PMCPMC3209170

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.