Evidence map›Paper›PMID 21908576›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2011

Merkel cell polyomavirus-specific CD8⁺ and CD4⁺ T-cell responses identified in Merkel cell carcinomas and blood.

Jayasri G Iyer, Olga K Afanasiev, Christopher McClurkan, Kelly Paulson, Kotaro Nagase, Lichen Jing, Joshua O Marshak, Lichun Dong, Joseph Carter, Ivy Lai and 6 more

Open access · greenAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 147 citations in OpenAlex.

  1. Trial
  2. Intratumoral G100, a TLR4 Agonist, Induces Antitumor Immune Responses and Tumor Regression in Patients with Merkel Cell Carcinoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2019
    Trial
  3. Trial
  4. Trial
  5. Article
  6. Article
  7. Article
  8. Article
  9. Of Context, Quality, and Complexity: Fine-Combing Tumor Mutational Burden in Immunotherapy-Treated Cancers.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Review
  10. Article
  11. Review
  12. Article
  13. Tumor Antigens beyond the Human Exome.International journal of molecular sciences · 2024
    Review
  14. Article
  15. Merkel cell polyomavirus-specific and CD39Cell reports. Medicine · 2024
    Article
  16. Review
  17. Review
  18. Review
  19. Therapeutic Cancer Vaccines for Nonmelanoma Skin Cancer.Current treatment options in oncology · 2023
    Review
  20. Article

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Jayasri G IyerDepartment of Medicine/Dermatology, University of Washington, Seattle, Washington 98109, USA.
Olga K Afanasiev
Christopher McClurkan
Kelly Paulson
Kotaro Nagase
Lichen Jing
Joshua O Marshak
Lichun Dong
Joseph Carter
Ivy Lai
Erik Farrar
David Byrd
Denise Galloway
Cassian Yee
David M Koelle
Paul Nghiem
Cancer Research Center · USFred Hutch Cancer Center · USBenaroya Research InstituteUniversity of Washington · USSaga University · JPSeattle Cancer Care Alliance · US

Funding

Pathogenetic and prognostic studies for improved therapy of Merkel cell carcinomaK24CA139052 · NCI · UNIVERSITY OF WASHINGTON · PI NGHIEM, PAUL · 2009 to 2018
$1.8M
Humoral and cellular immunity in polyomavirus-linked Merkel cell carcinomaR01CA162522 · NCI · UNIVERSITY OF WASHINGTON · PI NGHIEM, PAUL · 2011 to 2015
$1.6M
Targeting MCPyV to Overcome Immune Evasion in Merkel Cell CarcinomaRC2CA147820 · NCI · UNIVERSITY OF WASHINGTON · PI NGHIEM, PAUL · 2009 to 2010
$1.0M
The replication checkpoint and genomic fidelity in skinK02AR050993 · NIAMS · UNIVERSITY OF WASHINGTON · PI NGHIEM, PAUL · 2004 to 2008
$509k
Tumor immunity and escape mechanisms in a UV- and virus-associated skin cancerF30ES019463 · NIEHS · UNIVERSITY OF WASHINGTON · PI AFANASIEV, OLGA · 2010 to 2014
$162k
NCI NIH HHS K24 CA139052NCI NIH HHS K24-CA139052-0NCI NIH HHS R01 CA162522NCI NIH HHS R01CA162522NCI NIH HHS RC2 CA147820NCI NIH HHS RC2-CA147820-01NIAMS NIH HHS K02 AR050993NIAMS NIH HHS K02-AR50993NIEHS NIH HHS F30 ES019463NIEHS NIH HHS F30ES019463-01
6 · The paper itself

Abstract

purposeMerkel cell polyomavirus (MCPyV) is prevalent in the general population, integrates into most Merkel cell carcinomas (MCC), and encodes oncoproteins required for MCC tumor growth. We sought to characterize T-cell responses directed against viral proteins that drive this cancer as a step toward immunotherapy. EXPERIMENTAL

designIntracellular cytokine cytometry, IFN-γ enzyme-linked immunospot (ELISPOT) assay, and a novel HLA-A*2402-restricted MCPyV tetramer were used to identify and characterize T-cell responses against MCPyV oncoproteins in tumors and blood of MCC patients and control subjects.

resultsWe isolated virus-reactive CD8 or CD4 T cells from MCPyV-positive MCC tumors (2 of 6) but not from virus-negative tumors (0 of 4). MCPyV-specific T-cell responses were also detected in the blood of MCC patients (14 of 27) and control subjects (5 of 13). These T cells recognized a broad range of peptides derived from capsid proteins (2 epitopes) and oncoproteins (24 epitopes). HLA-A*2402-restricted MCPyV oncoprotein processing and presentation by mammalian cells led to CD8-mediated cytotoxicity. Virus-specific CD8 T cells were markedly enriched among tumor infiltrating lymphocytes as compared with blood, implying intact T-cell trafficking into the tumor. Although tetramer-positive CD8 T cells were detected in the blood of 2 of 5 HLA-matched MCC patients, these cells failed to produce IFN-γ when challenged ex vivo with peptide.

conclusionsOur findings suggest that MCC tumors often develop despite the presence of T cells specific for MCPyV T-Ag oncoproteins. The identified epitopes may be candidates for peptide-specific vaccines and tumor- or virus-specific adoptive immunotherapies to overcome immune evasion mechanisms in MCC patients.

Indexed as

AnimalsAntigens, Viral, TumorCarcinoma, Merkel CellCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesChlorocebus aethiopsCOS CellsEpitope MappingEpitopes, T-LymphocyteHLA-A24 AntigenHumansInterferon-gammaLymphocytes, Tumor-InfiltratingMerkel cell polyomavirusPeptidesPolyomavirus InfectionsAntigens, Viral, TumorEpitopes, T-LymphocyteHLA-A*24:02 antigenHLA-A24 AntigenInterferon-gammaPeptides

Identifiers

PMID21908576
PMCPMC3207011
OpenAlexW2101157971

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.