Evidence map›Paper›PMID 21903104›Full record

ArticleJournal of theoretical biology2011

A model for Vibrio cholerae colonization of the human intestine.

Anna Maria Spagnuolo, Victor Dirita, Denise Kirschner

Abstract read
In one paragraph

Article in Journal of theoretical biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Engineering a Novel Probiotic Toolkit inACS synthetic biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Anna Maria SpagnuoloDepartment of Mathematics and Statistics, Oakland University, Rochester, MI 48309-4485, USA. spagnuol@oakland.edu
Victor Dirita
Denise Kirschner
University of Michigan–Ann Arbor · USOakland University · US

Funding

MECHANISM OF VIRULENCE REGULATION BY MEMBRANE ACTIVATORSR01AI045125 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DIRITA, VICTOR J. · 1999 to 2014
$4.0M
Defining how the spectrum of latency affects reactivation of TBR01HL106804 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI FLYNN, JOANNE L., KIRSCHNER, DENISE E · 2010 to 2013
$2.6M
A multi-scale model to predict outcomes of immunomodulation and drug therapy duriR01EB012579 · NIBIB · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FLYNN, JOANNE L., KIRSCHNER, DENISE E · 2011 to 2014
$2.3M
A multi-scale and multi-system approach to understand granuloma formation in TBR33HL092853 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KIRSCHNER, DENISE E · 2008 to 2010
$684k
Gene Regulation by ToxR, TcpP and ToxT in V. choleraeR56AI045125 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DIRITA, VICTOR J. · 2009 to 2009
$327k
NHLBI NIH HHS R01 HL106804NHLBI NIH HHS R33 HL092853NHLBI NIH HHS R33HL092853NIAID NIH HHS AI045125NIAID NIH HHS R01 AI045125NIAID NIH HHS R56 AI045125NIBIB NIH HHS R01 EB012579
6 · The paper itself

Abstract

Vibrio cholerae is a strict human pathogen that causes the disease cholera. It is an old-world pathogen that has re-emerged as a new threat since the early 1990s. V. cholerae colonizes the upper, small intestine where it produces a toxin that leads to watery diarrhea, characterizing the disease (Kahn et al., 1988). The dynamics of colonization by the bacteria of the intestines are largely unknown. Although a large initial infectious dose is required for infection, data suggests that only a smaller sub-population colonizes a portion of the small bowel leading to disease. There are many barriers to colonization in the intestines including peristalsis, fluid wash-out, viscosity of the mucus layer, and pH. We are interested in identifying the mechanisms that allow this sub-population of bacteria to survive and colonize the intestines when faced with these barriers. To elaborate the dynamics of V. cholerae infection, we have developed a mathematical model based on a convection-diffusion-reaction-swimming equation capturing bacterial dynamics coupled with Stokes equations governing fluid velocity where we developed a novel non-local boundary condition. Our results indicate that both host and bacterial factors contribute to bacterial density in the gut. Host factors include intestinal diffusion and convection rates while bacterial factors include adherence, motility and growth rates. This model can ultimately be used to test therapeutic strategies against V. cholerae.

Indexed as

Models, BiologicalBacterial AdhesionCholeraDiffusionFinite Element AnalysisHumansIntestine, SmallRheologyVibrio choleraeVirulence

Identifiers

PMID21903104
PMCPMC3191311
OpenAlexW1998520884

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.