Evidence map›Paper›PMID 21901133›Full record

ArticlePloS one2011

Association of transcription factor gene LMX1B with autism.

Ismail Thanseem, Kazuhiko Nakamura, Ayyappan Anitha, Shiro Suda, Kazuo Yamada, Yoshimi Iwayama, Tomoko Toyota, Masatsugu Tsujii, Yasuhide Iwata, Katsuaki Suzuki and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Bio-collections in autism research.Molecular autism · 2017
    Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Ismail ThanseemDepartment of Psychiatry and Neurology, Hamamatsu University School of Medicine, Hamamatsu, Japan.
Kazuhiko Nakamura
Ayyappan Anitha
Shiro Suda
Kazuo Yamada
Yoshimi Iwayama
Tomoko Toyota
Masatsugu Tsujii
Yasuhide Iwata
Katsuaki Suzuki
Hideo Matsuzaki
Keiko Iwata
Toshiro Sugiyama
Takeo Yoshikawa
Norio Mori
Hamamatsu University School of Medicine · JPRIKEN Center for Brain Science · JPJichi Medical University · JP

Funding

A Natonal Resource for Postmortem Brain ResearchR24MH068855 · NIMH · MC LEAN HOSPITAL (BELMONT, MA) · PI BENES, FRANCINE M. · 2003 to 2012
$14.8M
NIMH NIH HHS R 24 MH 068855
6 · The paper itself

Abstract

Multiple lines of evidence suggest a serotoninergic dysfunction in autism. The role of LMX1B in the development and maintenance of serotoninergic neurons is well known. In order to examine the role, if any, of LMX1B with autism pathophysiology, a trio-based SNP association study using 252 family samples from the AGRE was performed. Using pair-wise tagging method, 24 SNPs were selected from the HapMap data, based on their location and minor allele frequency. Two SNPs (rs10732392 and rs12336217) showed moderate association with autism with p values 0.018 and 0.022 respectively in transmission disequilibrium test. The haplotype AGCGTG also showed significant association (p = 0.008). Further, LMX1B mRNA expressions were studied in the postmortem brain tissues of autism subjects and healthy controls samples. LMX1B transcripts was found to be significantly lower in the anterior cingulate gyrus region of autism patients compared with controls (p = 0.049). Our study suggests a possible role of LMX1B in the pathophysiology of autism. Based on previous reports, it is likely to be mediated through a seretoninergic mechanism. This is the first report on the association of LMX1B with autism, though it should be viewed with some caution considering the modest associations we report.

Indexed as

AdolescentAdultAutistic DisorderChildFemaleGenetic Predisposition to DiseaseGenotypeGyrus CinguliHumansIn Vitro TechniquesLIM-Homeodomain ProteinsMalePolymorphism, Single NucleotideReverse Transcriptase Polymerase Chain ReactionTranscription FactorsYoung AdultLIM homeobox transcription factor 1 betaLIM-Homeodomain ProteinsTranscription Factors

Identifiers

PMID21901133
PMCPMC3162001
OpenAlexW2053524294

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.