Evidence map›Paper›PMID 21901110›Full record

ArticlePLoS genetics2011

Mutations in fam20b and xylt1 reveal that cartilage matrix controls timing of endochondral ossification by inhibiting chondrocyte maturation.

B Frank Eames, Yi-Lin Yan, Mary E Swartz, Daniel S Levic, Ela W Knapik, John H Postlethwait, Charles B Kimmel

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 139 citations in OpenAlex.

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  14. Deficiency ofInternational journal of molecular sciences · 2023
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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

B Frank EamesInstitute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America. bfeame@uoneuro.uoregon.edu
Yi-Lin Yan
Mary E Swartz
Daniel S Levic
Ela W Knapik
John H Postlethwait
Charles B Kimmel
University of Oregon · USVanderbilt University · US

Funding

Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 1987 to 2017
$28.8M
CRANIOFACIAL MORPHOGENESIS IN ZEBRAFISHR01DE013834 · NIDCR · UNIVERSITY OF OREGON · PI KIMMEL, CHARLES B · 2000 to 2014
$6.9M
RESOURCES FOR TELEOST GENE DUPLICATES AND HUMAN DISEASER01RR020833 · NCRR · UNIVERSITY OF OREGON · PI POSTLETHWAIT, JOHN H. · 2005 to 2011
$3.6M
THE ROLE OF THE SECRETORY PATHWAY IN CRANIOFACIAL MORPHOGENESISR01DE018477 · NIDCR · VANDERBILT UNIVERSITY · PI KNAPIK, ELA W · 2007 to 2010
$1.5M
Dissecting the Genetics of Craniofacial SkeletogenesisF32DE016778 · NIDCR · UNIVERSITY OF OREGON · PI EAMES, BRIAN FRANK · 2005 to 2008
$146k
NCRR NIH HHS R01 RR020833NICHD NIH HHS P01 HD022486NICHD NIH HHS P01 HD22486NIDCR NIH HHS F32 DE016778NIDCR NIH HHS R01 DE013834NIDCR NIH HHS R01 DE018477NIDCR NIH HHS R01 DE13834
6 · The paper itself

Abstract

Differentiating cells interact with their extracellular environment over time. Chondrocytes embed themselves in a proteoglycan (PG)-rich matrix, then undergo a developmental transition, termed "maturation," when they express ihh to induce bone in the overlying tissue, the perichondrium. Here, we ask whether PGs regulate interactions between chondrocytes and perichondrium, using zebrafish mutants to reveal that cartilage PGs inhibit chondrocyte maturation, which ultimately dictates the timing of perichondral bone development. In a mutagenesis screen, we isolated a class of mutants with decreased cartilage matrix and increased perichondral bone. Positional cloning identified lesions in two genes, fam20b and xylosyltransferase1 (xylt1), both of which encode PG synthesis enzymes. Mutants failed to produce wild-type levels of chondroitin sulfate PGs, which are normally abundant in cartilage matrix, and initiated perichondral bone formation earlier than their wild-type siblings. Primary chondrocyte defects might induce the bone phenotype secondarily, because mutant chondrocytes precociously initiated maturation, showing increased and early expression of such markers as runx2b, collagen type 10a1, and ihh co-orthologs, and ihha mutation suppressed early perichondral bone in PG mutants. Ultrastructural analyses demonstrated aberrant matrix organization and also early cellular features of chondrocyte hypertrophy in mutants. Refining previous in vitro reports, which demonstrated that fam20b and xylt1 were involved in PG synthesis, our in vivo analyses reveal that these genes function in cartilage matrix production and ultimately regulate the timing of skeletal development.

Indexed as

AnimalsCartilageCells, CulturedChondrocytesChondroitin Sulfate ProteoglycansCollagenHedgehog ProteinsMutationOsteogenesisPentosyltransferasesPhosphotransferases (Alcohol Group Acceptor)UDP Xylose-Protein XylosyltransferaseZebrafishZebrafish ProteinsChondroitin Sulfate ProteoglycansCollagenFAM20B protein, zebrafishHedgehog ProteinsPentosyltransferasesPhosphotransferases (Alcohol Group Acceptor)UDP Xylose-Protein XylosyltransferaseZebrafish Proteins

Identifiers

PMID21901110
PMCPMC3161922
OpenAlexW2069073705

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.