Evidence map›Paper›PMID 21901109›Full record

ArticlePLoS genetics2011

Predisposition to cancer caused by genetic and functional defects of mammalian Atad5.

Daphne W Bell, Nilabja Sikdar, Kyoo-Young Lee, Jessica C Price, Raghunath Chatterjee, Hee-Dong Park, Jennifer Fox, Masamichi Ishiai, Meghan L Rudd, Lana M Pollock and 25 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 1 synthesis or guideline pooled it, 98 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. ATAD5 functions as a regulatory platform for Ub-PCNA deubiquitination.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Machine Learning Gene Signature to Metastatic ccRCC Based on ceRNA Network.International journal of molecular sciences · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Unraveling DNA Repair Processes In Vivo: Insights from Zebrafish Studies.International journal of molecular sciences · 2023
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 4 institutions in 4 countries.

Daphne W BellCancer Genetics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, United States of America. belldaph@mail.nih.gov
Nilabja Sikdar
Kyoo-Young Lee
Jessica C Price
Raghunath Chatterjee
Hee-Dong Park
Jennifer Fox
Masamichi Ishiai
Meghan L Rudd
Lana M Pollock
Sarah K Fogoros
Hassan Mohamed
Christin L Hanigan
NISC Comparative Sequencing Program
Suiyuan Zhang
Pedro Cruz
Gabriel Renaud
Nancy F Hansen
Praveen F Cherukuri
Bhavesh Borate
Kirk J McManus
Jan Stoepel
Payal Sipahimalani
Andrew K Godwin
Dennis C Sgroi
Maria J Merino
Gene Elliot
Abdel Elkahloun
Charles Vinson
Minoru Takata
James C Mullikin
Tyra G Wolfsberg
Philip Hieter
Dae-Sik Lim
Kyungjae Myung
National Institutes of Health · USUniversity of British Columbia · CAKyoto University · JPMassachusetts General Hospital · US

Funding

Inter- and Intra-Species Comparative SequencingZIBHG000196 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI THOMAS, JAMES · 2009 to 2025
$177.6M
Molecular Analyses of Endometrial CancerZIAHG200338 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BELL, DAPHNE · 2009 to 2025
$19.8M
Comparative Genomics Unit ResearchZIAHG200330 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI MULLIKIN, JAMES C · 2009 to 2022
$17.9M
NHGRI/DIR Microarray CoreZICHG200365 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI ELKAHLOUN, ABDEL · 2011 to 2025
$9.0M
Fox Chase Clinical Epidemiology and Validation CenterU01CA113916 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI ENGSTROM, PAUL FREDERICK · 2005 to 2015
$8.6M
Genome Instability in Cancer DevelopmentZIAHG012003 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI MYUNG, KYUNGJAE · 2009 to 2015
$7.0M
A NOVEL BREAST CANCER BIOMARKERR01CA112021 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI SGROI, DENNIS C · 2005 to 2013
$2.6M
Exploiting Biological Networks to Improve Clinical Treatment of Ovarian CancerR01CA140323 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI GODWIN, ANDREW K. · 2010 to 2014
$2.1M
CIHR MOP-38096Intramural NIH HHSNCI NIH HHS R01-1CA112021-01NCI NIH HHS R01 CA112021NCI NIH HHS R01 CA140323NCI NIH HHS U01 CA113916
6 · The paper itself

Abstract

ATAD5, the human ortholog of yeast Elg1, plays a role in PCNA deubiquitination. Since PCNA modification is important to regulate DNA damage bypass, ATAD5 may be important for suppression of genomic instability in mammals in vivo. To test this hypothesis, we generated heterozygous (Atad5(+/m)) mice that were haploinsuffficient for Atad5. Atad5(+/m) mice displayed high levels of genomic instability in vivo, and Atad5(+/m) mouse embryonic fibroblasts (MEFs) exhibited molecular defects in PCNA deubiquitination in response to DNA damage, as well as DNA damage hypersensitivity and high levels of genomic instability, apoptosis, and aneuploidy. Importantly, 90% of haploinsufficient Atad5(+/m) mice developed tumors, including sarcomas, carcinomas, and adenocarcinomas, between 11 and 20 months of age. High levels of genomic alterations were evident in tumors that arose in the Atad5(+/m) mice. Consistent with a role for Atad5 in suppressing tumorigenesis, we also identified somatic mutations of ATAD5 in 4.6% of sporadic human endometrial tumors, including two nonsense mutations that resulted in loss of proper ATAD5 function. Taken together, our findings indicate that loss-of-function mutations in mammalian Atad5 are sufficient to cause genomic instability and tumorigenesis.

Indexed as

Adenosine TriphosphatasesAneuploidyAnimalsATPases Associated with Diverse Cellular ActivitiesCell LineCell Transformation, NeoplasticDNA-Binding ProteinsDNA DamageEndometrial NeoplasmsFemaleGenetic Predisposition to DiseaseGenomic InstabilityHumansMaleMiceMutationAdenosine TriphosphatasesATAD5 protein, humanATPases Associated with Diverse Cellular ActivitiesDNA-Binding ProteinsProliferating Cell Nuclear Antigen

Identifiers

PMID21901109
PMCPMC3161924
OpenAlexW2062511407

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.